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Name : lcrD1 (COCOR_06135) Accession : YP_005372088.1 Strain : Corallococcus coralloides DSM 2259 Genome accession: NC_017030 Putative virulence/resistance : Virulence Product : FHIPEP family type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 7734076 - 7736154 bp Length : 2079 bp Strand : - Note : - DNA sequence : ATGATGCCCCCATTCCTGAAGGTCTTGCTGAAGGCCCGTCAGTCCTCGGACGTCATGCTCGCGGTGGCGATGGCGGCGGT GCTGGGGGCGCTCATCATCCCGCTGCCGGCGTGGCTCCTCGACATGGGGCTCGCGGTGAACCTGGCCGCGGCGGTGGCGC TGCTGGTCGCGGCGCTGAACGCGAAGGACGCGCTGCGGGTGACGTCGTTCCCCACGTTGCTGCTGTTCACCACGCTGTTC CGGCTGTCGCTCAACGTGTCGTCCACGCGGCTGGCGCTCTCCGAGGGCCACGCGGGCGAGGTCATCCAGGCCTTCGGCGA GTTCGTGGTGCGAGGCGACTACGTGGTGGGCGCGGTGGTGTTCGCCATCCTCACGCTGGTGCAGTTGCTGGTGGTGACCA AGGGCGCCGAGCGGGTGGCGGAGGTGTCCGCCCGCTTCACGCTGGACGCCATGCCCGGCAAGCAGATGTCCATCGACGCG GACCTGCGCGCGGGCGCCATCGACCAGACCCAGGCCCGGCGCAGGCGGCGCGACCTGGAGCGCGAATCCCAGATGTTCGG TGCCATGGACGGCGCGATGAAGTTCGTGAAGGGGGATGTCATCGCGGGCCTGGTCATCGTCGCGGTGAACCTGCTGGGCG GCACCCTCATCGGCGTGTTGCAGAACGGCCAGTCCTTCTCCGAGGCCGCCGCCACCTTCGCGCTCATCGCCATCGGCGAC GGGCTCGTGTCCCAGATACCTTCGCTGTGCATCGCGGTGGCCGCGGGTCTCGTCGTCACGCGGGTGGCATCGGAGAAGGA AGAAGACTCGCTCGGGGCGGAGATCGGCTCCCAGTTCTTCGGTGACTTCCGCACGCTGACCACCGTCGCGGGCCTGTGCG TCGCGCTGGCCTTGATGCCGGGCATGCCGCACCTGACCTTCCTCTCGCTGGCGGCGGGCCTGGGCGGGCTCGGGTATGCG CTGCGGCGCAAGGGCCAGGCGCCGGAGAAGTCACTGGCGAAGGATGGCGCCTCCTCGGAGGCCGCGGTGCCCGCTGGAGC CGCTGGCAAGCCGCCGGAGAGCGCGAAGGCTCCGGTCGGGGTGACGCCGCTCACGCTGGACCTGTCCGCGCAGCTGACGC CGCTCGCGGAGGCGGACGGAGGCGCCTTCGTGCACACGGTGCTGAACGCCGTGCGCGACGAGCTGTTCTTCGAACTGGGC GTGCGCATCCCTGGCATCCGGGTGCGGACCCACGCCGCCTACCTGGGCCCCGGCGAGTACCGCATCCTCCTGGACGAGGT GCCCGCAGGTGGCGGCGTGGTGCAGCCCGGCGCCCTGTACGCGCTCGTTCCTCCGGGTGAGCTGGCCTTCCTGGAGGTCC AGGCGGAGGCGTCGGTGGAGCCCGCCAGCGGGCGGCCCATCAGCCGCGTGGGGGAGGGCGCCCGCTCGCGGCTGGAGCTG GCCCAGGTGCCGGTGCGCAAGCCCTCGGAGCTCATCGCGGACCACCTGCGGGCCGTGCTGCGCCTGCGCGCCGCCGCGCT GCTGGGACTCCAGGAGGTGCAGGGACTGCTGGAGGGGCTGGAGGCCCAGTCGCCCGTGCTGGTGAAGGAAGCGCTGCAGA AGGTGCCGCTGCCGCTGCTGGTGGACGTGCTGCGGCGGCTCGTGCAGGAACAGGTGAGCATCCGCGACCTGCGCGCCATC CTGGAGGCGCTCGTGGCGCCCACCACGGAAGGCGACGCCACGGCCCTGGCCGAGCGCTGCCGTCAGGCCCTGCACCGCTA CCTGAGCCACCAGTTCGCGCCCACGGGCCCGCTGTACGCGTACCTCGTGGATCCAGAAGTGGAGGAGGTGCTGCGCGCCA GCGGTCCCCGAGGGCTCGCGCCGGAGCCGGAGCGCATCATGGAGATTCTGGAAGGGGTGCGGGTCATCGCCAACGGCGGC CGGGCGGTGGTGCTCGCGGCCCCGGACATCCGCCGTCCGCTGCGCAAGCTGTGCGAAGGCCCGTTCCCAGACGTGGCGGT GCTCACCTACGGCGAGCTGGACGGAGACCTGCAGATTCGCCCCATCGGCCGGCTGTCGCCGGTCGCCGTGGGGCGGTGA Protein sequence : MMPPFLKVLLKARQSSDVMLAVAMAAVLGALIIPLPAWLLDMGLAVNLAAAVALLVAALNAKDALRVTSFPTLLLFTTLF RLSLNVSSTRLALSEGHAGEVIQAFGEFVVRGDYVVGAVVFAILTLVQLLVVTKGAERVAEVSARFTLDAMPGKQMSIDA DLRAGAIDQTQARRRRRDLERESQMFGAMDGAMKFVKGDVIAGLVIVAVNLLGGTLIGVLQNGQSFSEAAATFALIAIGD GLVSQIPSLCIAVAAGLVVTRVASEKEEDSLGAEIGSQFFGDFRTLTTVAGLCVALALMPGMPHLTFLSLAAGLGGLGYA LRRKGQAPEKSLAKDGASSEAAVPAGAAGKPPESAKAPVGVTPLTLDLSAQLTPLAEADGGAFVHTVLNAVRDELFFELG VRIPGIRVRTHAAYLGPGEYRILLDEVPAGGGVVQPGALYALVPPGELAFLEVQAEASVEPASGRPISRVGEGARSRLEL AQVPVRKPSELIADHLRAVLRLRAAALLGLQEVQGLLEGLEAQSPVLVKEALQKVPLPLLVDVLRRLVQEQVSIRDLRAI LEALVAPTTEGDATALAERCRQALHRYLSHQFAPTGPLYAYLVDPEVEEVLRASGPRGLAPEPERIMEILEGVRVIANGG RAVVLAAPDIRRPLRKLCEGPFPDVAVLTYGELDGDLQIRPIGRLSPVAVGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 5e-66 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lcrD1 | YP_005372088.1 | FHIPEP family type III secretion protein | VFG2126 | Protein | 5e-69 | 43 |
| lcrD1 | YP_005372088.1 | FHIPEP family type III secretion protein | VFG0064 | Protein | 4e-77 | 43 |
| lcrD1 | YP_005372088.1 | FHIPEP family type III secretion protein | VFG0384 | Protein | 5e-65 | 41 |
