Gene Information

Name : metB1 (COCOR_06056)
Accession : YP_005372009.1
Strain : Corallococcus coralloides DSM 2259
Genome accession: NC_017030
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism PLP-dependent enzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7637473 - 7638618 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCTTCGACACGCTCGCCATCCACGCCGGCCAGGAGCCGGATCCCACCACCGGCGCCATCATGACGCCCGTGTACCT
GACCTCCACCTACGTCCAGGACGGGCCGGGGGAGCACAAGGGCTACGAGTACAGCCGCACGCAGAACCCCACGCGCAAGG
CGCTGCAGGACTGCCTGGCCGCGCTGGAAGGCGCGAAGTACGGCGCCGCGTTCGCGTCCGGCCTGGCCGGCACGGACATG
CTGATGCACATGCTGGAGGCCGGTGACCACGTCATCGTCTCCGACGACGTGTACGGCGGCACCTTCCGCATCTTCGACAA
GGTGTTCAAGCGCTCTGGCCTGAACTTCTCCTTCGTGGACCTCTCCAAGCCGGAGAACTTCGAGGCGGCCATCACCCCGA
AGACGAAGATGGTCTGGGTGGAGACGCCGACGAACCCGATGCTCAAGCTCATCGACCTGGCGCGCATCGCCGAGGTCGCC
AAGAAGCGCGGCATCATCTCCGTCGCGGACAACACGTTCATGACGCCGTACTTCCAGAAGCCCCTCAACCTGGGCTTCGA
CGTCGTGGCGCACTCCACGACGAAGTACCTCAACGGCCACAGCGACGTGGTGGGCGGCTTCGTCTGCACCAGCCGCGACG
ACATCGCGGAGCGGATGTACTTCCTGCAGAACGCGGTGGGCGGCGTGTCCGGCGCCTTCGACAGCTTCCTCGTGCTGCGC
GGAGTGAAGACGCTGCACGTGCGCATGGACCGCCACGCGCAGAACGCGATGAAGGTGGCCCAGTACCTGTCCACGCACAA
GCAGGTGAAGAAGGTCACCTACCCGGGCCTGGAGACGCACCCGCAGCACGCGCTCGCCAAGCAGCAGATGACGGGCTTCG
GCGGCATGCTGACGTTCGACATCCACGGCGGCCTGGAGGCGGCGCGCACCTTCCTCAAGACGGTGAAGGTCTTCGCCTGC
GCCGAGTCCCTGGGCGGCGTCGAGTCCCTCATCGAGCACCCGGCCATCATGACCCACGCCTCCATCCCCAGGGAGACGCG
GGAGAAGCTGGGCATCGCGGATGGCTTCATCCGCCTGTCCGTCGGCATCGAGGACGCGCAGGACCTCATCGACGACCTCG
CGAACGCGCTCGACCGCGTGAAGTAG

Protein sequence : 
MRFDTLAIHAGQEPDPTTGAIMTPVYLTSTYVQDGPGEHKGYEYSRTQNPTRKALQDCLAALEGAKYGAAFASGLAGTDM
LMHMLEAGDHVIVSDDVYGGTFRIFDKVFKRSGLNFSFVDLSKPENFEAAITPKTKMVWVETPTNPMLKLIDLARIAEVA
KKRGIISVADNTFMTPYFQKPLNLGFDVVAHSTTKYLNGHSDVVGGFVCTSRDDIAERMYFLQNAVGGVSGAFDSFLVLR
GVKTLHVRMDRHAQNAMKVAQYLSTHKQVKKVTYPGLETHPQHALAKQQMTGFGGMLTFDIHGGLEAARTFLKTVKVFAC
AESLGGVESLIEHPAIMTHASIPRETREKLGIADGFIRLSVGIEDAQDLIDDLANALDRVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-90 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-91 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-63 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB1 YP_005372009.1 Cys/Met metabolism PLP-dependent enzyme BAC0207 Protein 4e-69 43