Gene Information

Name : aldB (COCOR_00596)
Accession : YP_005366603.1
Strain : Corallococcus coralloides DSM 2259
Genome accession: NC_017030
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 706722 - 708248 bp
Length : 1527 bp
Strand : -
Note : -

DNA sequence :
ATGTCGAAGGTCTATGAAGCTCCGGGTCAGAAGGGCAGCAAGGTCGAGTACAAGAGCCGCTACGGCAACTACATCGGCGG
TGAGTTCGTCCCGCCCGTGAAGGGCCAGTACTTCGAGAACATCAGCCCCGTCACCGGCCGCCCCTTCTGCGAGATTCCCC
GCTCCACGGCGGAGGACATCGAGAAGGCGCTCGACGCCGCGCACAAGGCGAAGGACGCGTGGGGCCGCACCGCCGCCGGC
GAGCGGGCCAACATCCTGCTGAAGATCGCCGACCGCATGGAGCAGAACCTGGAGATGCTCGCCGTCTCCGAGACGTGGGA
CAACGGCAAGCCCATCCGCGAGACGCTCGCCGCGGACCTCCCGCTCGCCATCGACCACTTCCGCTACTTCGCCGGTTGTA
TCCGCGCGCAGGAAGGCTCGCTCAGCCAGCTGGATGACAACACCGTCGCCTACCACTTCACGGAGCCGCTCGGCGTCGTG
GGGCAGATCATCCCGTGGAACTTCCCGCTGCTCATGGCCGCGTGGAAGCTGGCCCCCGCGCTCGCCGCCGGCAACTGCGT
GGTGCTCAAGCCCGCGGAGCAGACCCCCGTCACCATCCTCAAGTTCGCGGAGCTGGTGGGCGACCTGCTTCCCCCGGGCG
TGCTCAACATCGTGAACGGCTTCGGCATCGAGGCCGGCAAGCCGCTCGCCAGCAACAAGCGCATCGCGAAGATTGCCTTC
ACGGGTGAGACGACCACCGGCCGCCTCATCATGCAGTACGCCTCCGAGAACATCATCCCCGTCACCCTGGAACTGGGCGG
CAAGTCCCCCAACATCTTCTTCGAGGACGTCTTCGCCAGGGACGACGACTTCGCCCAGAAGGCGCTGGAGGGCTTCGCCA
TGTTCGCCCTCAACCAGGGCGAGGTCTGCACCTGCCCGTCCCGCTCGCTCGTCGCCGAGCGCTTCTACGACGAGTTCATC
GCCAAGGCGGTGGAGCGCACGAAGCGCATCGTGCAGGGCAACCCCCTGGACACCACCACGCAGATTGGCGCGCAGGCGTC
CAATGATCAGCTGGAGAAGATCCTCAGCTACCTGGACATCGGCCGGAAGGAGGGCGCGAAGGTGCTCACCGGCGGCGGGC
GCAAGGCGCTGCCCGGCGCGCTGGCGGAGGGCTACTACGTGGAGCCCACCATCTTCGAGGGCCACAACAAGATGCGCGTG
TTCCAGGAGGAGATCTTCGGCCCCGTCGTCGCGGTGGCGAAGTTCAAGGACGCAGAGGACGCGCTCGCGATGGCCAATGA
CACGCTCTACGGCCTGGGCGCCGGCGTGTGGACGCGCGACAACAGCACCGCGTACCGCATGGGCCGCGGCATCCAGGCGG
GCCGCGTCTGGGTGAACTGCTACCACCTGTACCCCGCGCACGCGGCGTTCGGCGGCTACAAGCAGTCCGGCATCGGGCGT
GAGACGCACAAGATGATGCTCAATCACTACCAGCAGACGAAGAACCTGCTCGTCAGCTACGACCCGAAGCCCATGGGCTT
CTTCTAG

Protein sequence :
MSKVYEAPGQKGSKVEYKSRYGNYIGGEFVPPVKGQYFENISPVTGRPFCEIPRSTAEDIEKALDAAHKAKDAWGRTAAG
ERANILLKIADRMEQNLEMLAVSETWDNGKPIRETLAADLPLAIDHFRYFAGCIRAQEGSLSQLDDNTVAYHFTEPLGVV
GQIIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPVTILKFAELVGDLLPPGVLNIVNGFGIEAGKPLASNKRIAKIAF
TGETTTGRLIMQYASENIIPVTLELGGKSPNIFFEDVFARDDDFAQKALEGFAMFALNQGEVCTCPSRSLVAERFYDEFI
AKAVERTKRIVQGNPLDTTTQIGAQASNDQLEKILSYLDIGRKEGAKVLTGGGRKALPGALAEGYYVEPTIFEGHNKMRV
FQEEIFGPVVAVAKFKDAEDALAMANDTLYGLGAGVWTRDNSTAYRMGRGIQAGRVWVNCYHLYPAHAAFGGYKQSGIGR
ETHKMMLNHYQQTKNLLVSYDPKPMGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-144 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-150 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_005366603.1 aldehyde dehydrogenase VFG0082 Protein 4e-145 64