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Name : lcrD (COCOR_05618) Accession : YP_005371571.1 Strain : Corallococcus coralloides DSM 2259 Genome accession: NC_017030 Putative virulence/resistance : Virulence Product : type III secretion protein LcrD/AscV Function : - COG functional category : - COG ID : - EC number : - Position : 7061949 - 7064075 bp Length : 2127 bp Strand : - Note : - DNA sequence : ATGGCCAACGCCGATCCGAACAGCTTCCTGAACAAGTACTCCGACATTGTCCTCGCGGTGGTCGTCGTGGCCATCGTGGC GATGATGATCGTCCCGCTGCCGACGATCGTCCTGGACGTGTTGCTGACGCTGAACATCAGCATCTCGGTGGTACTGCTCC TCATCTCCCTCTACGTGCCCAGCGCGCTGTACCTGTCGTCGTTCCCGACGATCCTGCTGATCACGACGATGTTCCGTCTG TCGCTGACCATCTCCACCACGCGACTCATCCTGCTCACCGGCGACCCCGGCGAAGTGGTGGTGGCGTTCGGTAACTTCGT GGTGCAGGGCAACTTCGTCGTCGGCGCCATCCTCTTCCTCATCCTGGTGGTGGTGAACTTCATCGTCATCTCCAAGGGCT CGGAGCGTGTCGCGGAAGTGGCCGCGCGCTTCACCCTGGACGCCATGCCCGGCAAGCAGATGTCCATCGACGCGGACCTG CGCGCCGGCGTGATCGATCAGGATCAGATGAAGAAGAAGCGCCGCGACCTGGAGCGTGAGAGCCAGCTCTTCGGCGCCAT GGACGGCGCGATGAAGTTCGTGAAGGGCGACGCCATCGCGTCCATCATCATCACGGTCATCAACATCGTGGGCGGCCTCA TCATCGGCGTCACGCAGAAGGGCATGGCCGCCGGTGACGCCGCGCAGAAGTACACGCTGCTCACCATCGGTGACGGTCTG GTGGGCATGATCCCCGCCATCCTCATCTCCACCTGCGCCGGTATCCTGGTGACGCGCGTGGGCGGCGAGGAAGAGGGCGC GCACCTGGGCAAGGACGTGGGCACGCAGCTCACCGCCTTCCCGAAGGCCATCGCCATCGCGGCGGCCATGCTCGTGGGCC TGGGCCTCATCCCCGGCCTCCCCAAGATTCCCTTCTTCCTGCTGGGCGCGGGCGCGGGCTTCGGCGCCTGGACGATGATG CGCAAGCGCGACGAGGCGCTGGCCGCCGAGGAAGCCGGCCCCGCGATGGAGTCCAGCTTCGGCACGCCCGTGTCCGCCGA GCCTCCGCCCAAGGAGCAGCTCAACCCGGACTCGGAGCTGTTCATCCCCGTCGTCACGCCCATCGTGCTGGAGGTATCCG ACGCGCTGGTGCCCTTCGTGGACTCGCGGCAGGACGGCGGCAAGTTCCTCTTCGAGCTCATCCCGTTCATGCGCGACGGC CTCTTCGTGGAGCTGGGCGTGCGCTTCCCCGGCGTGCGCGCGCGCGGCAATGGCGGCCTGCCGCCCGGGGCCTACCAGAT TCAGATCAACGAAGTTCCCGTCGTCACCGGCCAGGCCACCCTGGGCCACATCCTGGTGAACGACACGGTGGAGCGCCTCA AGCTGATGAACATCCCCGGCTTCGAGGCCATCAACCCCGCGACGCGCCAGCCGGCCGCGTGGGTGCCCGAGCAGTTCCGG GAGACGCTCGAGTCCGCGGGCCTCACCACGTGGGACGTGCCCGGCTACATCATCCTGCACACGGCCGCCGTGCTCCGGAA GAACGCGCGCGAGTTCGTGGGCGTGCAGGAGACGCAGACGATGCTGGAGCAGTTGGAGAAGGCGTTCCCGGCCATCGTGA AGGAAGTGGTCCCGAAGATCGTCAACGTGCTGAAGCTGACGGACATCCTCGGGCGCCTGGTGGAGGAGGAGATCTCCATC CGCGACCTGCGCGGCATCCTCCAGGCCCTGTCCGAGTACGGCCAGGTGGAGGCCGACAACGTCATGCTCACCGAGCATGT CCGCGCCTCGCTGCGCCGCTACATCTCCCACAAGTACGCGCGCGGCACCGGCACCCTGGTGGTGTACCTGCTCGACCCGA ACATCGAGGAGGCCATCCGCAGCTCCATCAAGCGCACCTCCGCGGGCGCGCACCTGGCGCTGGAGCCGGAGATCGCCCAG GAGATCGTCGGCGCGGTGCGCTCGGAGTGCGGCCACCTGCCGCCCAGCGCCCAGCGCCCCGTCATCCTCACGGCGATGGA CATCCGCCGCTACGTGCGCAAGCTGCTGGAGTACGAGTTCAACCCCTCGTTCTCCATCCTCAGCTACCAGGAGCTGTCCC CGGACCTGAACATCCAGCCGGTGGCGCGCATCTCCTCCGGCCGGTAG Protein sequence : MANADPNSFLNKYSDIVLAVVVVAIVAMMIVPLPTIVLDVLLTLNISISVVLLLISLYVPSALYLSSFPTILLITTMFRL SLTISTTRLILLTGDPGEVVVAFGNFVVQGNFVVGAILFLILVVVNFIVISKGSERVAEVAARFTLDAMPGKQMSIDADL RAGVIDQDQMKKKRRDLERESQLFGAMDGAMKFVKGDAIASIIITVINIVGGLIIGVTQKGMAAGDAAQKYTLLTIGDGL VGMIPAILISTCAGILVTRVGGEEEGAHLGKDVGTQLTAFPKAIAIAAAMLVGLGLIPGLPKIPFFLLGAGAGFGAWTMM RKRDEALAAEEAGPAMESSFGTPVSAEPPPKEQLNPDSELFIPVVTPIVLEVSDALVPFVDSRQDGGKFLFELIPFMRDG LFVELGVRFPGVRARGNGGLPPGAYQIQINEVPVVTGQATLGHILVNDTVERLKLMNIPGFEAINPATRQPAAWVPEQFR ETLESAGLTTWDVPGYIILHTAAVLRKNAREFVGVQETQTMLEQLEKAFPAIVKEVVPKIVNVLKLTDILGRLVEEEISI RDLRGILQALSEYGQVEADNVMLTEHVRASLRRYISHKYARGTGTLVVYLLDPNIEEAIRSSIKRTSAGAHLALEPEIAQ EIVGAVRSECGHLPPSAQRPVILTAMDIRRYVRKLLEYEFNPSFSILSYQELSPDLNIQPVARISSGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 3e-110 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lcrD | YP_005371571.1 | type III secretion protein LcrD/AscV | VFG0384 | Protein | 3e-106 | 47 |
| lcrD | YP_005371571.1 | type III secretion protein LcrD/AscV | VFG0064 | Protein | 9e-115 | 47 |
| lcrD | YP_005371571.1 | type III secretion protein LcrD/AscV | VFG0198 | Protein | 2e-102 | 47 |
| lcrD | YP_005371571.1 | type III secretion protein LcrD/AscV | VFG2126 | Protein | 9e-106 | 46 |
