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Name : gspE (COCOR_05576) Accession : YP_005371529.1 Strain : Corallococcus coralloides DSM 2259 Genome accession: NC_017030 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 7009926 - 7011752 bp Length : 1827 bp Strand : + Note : - DNA sequence : ATGGACCTGACCGCCGACACCACCACCTCTCAAGGCTCCACCGCGACGCCCGACGTGTCCGGCGGCCGCAACGACGCCAC CCAGGTCGTGGGCCACGGGCTCGCGTACCTCTGTGGCCGGCCGCTCGGGGAGATCCTCCGCGCGCTCGTGCCCGCCCTCA CCCCGGAGAAGATTCAAGAGGCGCTCGCCACCCAGCAGGAGAAGGGCGGGCGGCTGGGTGAAGTCCTGGTGGGCATGAAG GCCGTCAGCGAGGAGGACGTCGCTCGCGCCCTGGGCCACCAGTTGGACCTGCCCTACCTCCAGCGCATCTTCGCGGAGGA GGTGGACGCGGACCTGGTCAAGCGCATCCCCATCAACTTCGCCCGCCAGACGCAGCTGCTCCCCATCTCCCTGGAGGGCG ACGAGGTGGTGCTCGCGGTGGCGGATCCGCTGGACACCACCGCGCTGGATCACGCGCGCCTGCTGTTGGGTCAGGGCATC CAGCCGCGCATCGCGCTCGCGTCCACCATCGTGGACGCCATCAACAGCGTGTACGACCGCTCCGTCAACGAGGCCGAAGC GCTCGTGGACGAGATGGAGACCACGGAGGACCTGGACTCGCTGGCCCATGAGCTGGAGGAGCCCAAGGACCTGCTGGACG CGGACGATGAAGCGCCCGTCATCCGGCTGGTGAACTCCGTGCTCTTCCGCGCCGCCAAGGAGCGCGCGAGCGATATCCAC ATCGAGCCCATGGAGCGCGAGCTCCTGGTGCGCTTCCGCATCGACGGTGTGCTCCAGGAGGTCATCAAGCCTCCCAAGCG CTACCAGAACTCCATCATCGCGCGCGTGAAGGTGATGGGGCAGCTCAACATCGCGGAGAAGCGCCTGCCGCAGGACGGCC GCATCCGCATCAAGCTCGCGGGCCGCGACATCGACATCCGTCTGTCCACCACGCCCACGTCCTTTGGCGAGCGCATCGTC ATGCGTCTCCTGGACAAGACGGCGACGCTGCTGGACCTGGCGGAGATCGGCATGAGCCCGCAGGTGCTGGGCAACATGGA GTCCGTCATCAAGCGCTCGCACGGCATCGTCCTGGTGACGGGCCCCACGGGCTCCGGCAAGACGACGACGCTCTACGGCG CGCTCTCGAAAATCAACACGCCGGACCTCAACATCCTCACCGTCGAGGACCCGGTCGAGTACCAGCTCAAGGGCATTGGC CAGATGGCCATCGCCCCGAAGATCGGCCTCACGTTCGCGCAGGGCCTGCGCTCCTTCCTCCGCCAGGACCCCGACGTCAT CATGGTCGGTGAGATCCGCGACAAGGAGACGGCGGAGATCGCCATCCAGGCGTCCCTCACGGGCCACCTGGTGCTCTCCA CGGTGCACACCAACGACGCGGCCGGCGCCGTGACGCGACTCGTGGACATGGGCGTGCAGCCCTTCCTCGTGGCGTCGTCG CTCACCGGCATCCTCGCCCAGCGCCTCGTGCGCCGGGTGTGCCCGGACTGCCGCCAGCAGTACACGCCCACGGACGCGGA GCTGAAGGAGCTGGGCTACACGGTCGCGGACTTCAAGGCGAAGTTCGGCACGGACCGCATCTACCGCGCGACGGGTTGCC CGTCCTGCAACCGCAACGGCTACCGCGGCCGCTCCGGCATCTACGAGTTCCTCTTCGTGGACGACGACGTGCGCCAGCTG GTGCTCAAGAACGTGGACGCGTCCACCATCAAGAAGTCCGCCCTGTCCAAGGGCATGACGACGCTGCTGGACGACGGCGT GCGGAAGATCGCCCTGGGCGAGACGACCATCGCCGAAGTGCTGAGCATCACGCAGGAGGACATCTAG Protein sequence : MDLTADTTTSQGSTATPDVSGGRNDATQVVGHGLAYLCGRPLGEILRALVPALTPEKIQEALATQQEKGGRLGEVLVGMK AVSEEDVARALGHQLDLPYLQRIFAEEVDADLVKRIPINFARQTQLLPISLEGDEVVLAVADPLDTTALDHARLLLGQGI QPRIALASTIVDAINSVYDRSVNEAEALVDEMETTEDLDSLAHELEEPKDLLDADDEAPVIRLVNSVLFRAAKERASDIH IEPMERELLVRFRIDGVLQEVIKPPKRYQNSIIARVKVMGQLNIAEKRLPQDGRIRIKLAGRDIDIRLSTTPTSFGERIV MRLLDKTATLLDLAEIGMSPQVLGNMESVIKRSHGIVLVTGPTGSGKTTTLYGALSKINTPDLNILTVEDPVEYQLKGIG QMAIAPKIGLTFAQGLRSFLRQDPDVIMVGEIRDKETAEIAIQASLTGHLVLSTVHTNDAAGAVTRLVDMGVQPFLVASS LTGILAQRLVRRVCPDCRQQYTPTDAELKELGYTVADFKAKFGTDRIYRATGCPSCNRNGYRGRSGIYEFLFVDDDVRQL VLKNVDASTIKKSALSKGMTTLLDDGVRKIALGETTIAEVLSITQEDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-107 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-108 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_005371529.1 | general secretion pathway protein F | VFG2048 | Protein | 3e-110 | 48 |
| gspE | YP_005371529.1 | general secretion pathway protein F | VFG0182 | Protein | 1e-108 | 48 |
| gspE | YP_005371529.1 | general secretion pathway protein F | VFG1876 | Protein | 5e-98 | 45 |
| gspE | YP_005371529.1 | general secretion pathway protein F | VFG1880 | Protein | 6e-89 | 41 |
