Gene Information

Name : opuCA (COCOR_00516)
Accession : YP_005366523.1
Strain : Corallococcus coralloides DSM 2259
Genome accession: NC_017030
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 619557 - 620306 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence :
GTGTTCCTCCTGGAAGGAGTGTCCAAGCGCTTCGGTGCCGCGCAGGCCCTGCACCCGCTGGACTTGAGCCTGCCCAAGGG
CGCCACCACGGTGCTCATCGGTCCCAGTGGCTGCGGGAAGTCCACGCTGCTGCGGCTGCTCAACGGCCTGCTGCGGCCCG
ATACAGGACGCGTCCTCTTCGACGGACAGCCCCTTCCGGAGGATGGGGACGCATTGCTCGCCGTGCGCCAACGCGTGGGC
TACGCGCTCCAGGGCGGAGGCCTGTTCCCGCACCTCACCGGCGCGCGGAACGTCACGCTGATGGCACGGCACCTGCGCTG
GCCGGAGGCGCGGATCCGCGAGCGGCTGGCGCGGTTGATGGACCTGACGCGCTTCCCGGCGGAGGCACTGGAGCGCTTGC
CGGGTGAGCTCTCCGGAGGTCAGCGGCAGCGCGTGGCGTTGATGCGCGCGCTGATGCTGGACCCGGACGTGCTGCTGCTG
GATGAACCCCTGGGCGCGTTGGATCCGCTGGTGCGCCATGACCTCCAGACGGACCTGCGCGGCATCTTCGAGCGGCTGGG
CAAGACGGTGGTGCTCGTCACGCACGACCTGGCGGAAGCCGCCTTCCTGGGCGACGGCATCGTGTTGATGCGCGAGGGCC
AGGTGGTGCAGCAGGGCACGCTGGACGACCTGGAGGCACGTCCCAAGGATCCGTTCGTCACGCGGTTCATCCAGGCGCAG
CGCCCGTTGCCCCTGCGGAGGCCGGGATGA

Protein sequence :
MFLLEGVSKRFGAAQALHPLDLSLPKGATTVLIGPSGCGKSTLLRLLNGLLRPDTGRVLFDGQPLPEDGDALLAVRQRVG
YALQGGGLFPHLTGARNVTLMARHLRWPEARIRERLARLMDLTRFPAEALERLPGELSGGQRQRVALMRALMLDPDVLLL
DEPLGALDPLVRHDLQTDLRGIFERLGKTVVLVTHDLAEAAFLGDGIVLMREGQVVQQGTLDDLEARPKDPFVTRFIQAQ
RPLPLRRPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-30 44
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-29 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
opuCA YP_005366523.1 ABC transporter ATP-binding protein VFG2059 Protein 9e-07 43