Gene Information

Name : pyk1 (COCOR_04528)
Accession : YP_005370494.1
Strain : Corallococcus coralloides DSM 2259
Genome accession: NC_017030
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5733905 - 5735305 bp
Length : 1401 bp
Strand : +
Note : -

DNA sequence :
ATGCGCAAGGCGAAGATCATCTGCACGCTGGGTCCGGCTTCGGACTCCAAGGAAGTCATCGAGGGACTGGTGAAGGCGGG
CATGAACGTGGCCCGGCTCAACTTCTCTCACGGGACGCACGACGAGCACCGCCAGCGCGTCCAGCGCATCCGCGCGGCGT
CGAAGAAGCTGGGCGTGCCGGTGGCCATCCTCCAGGACGTGCAGGGCCCCAAGGTGCGCCTGGGGCGCTTCGAGGGTGGC
CAGCTGATGGTGACGGCCGGTGACACGGTGACGGTGACGACGCGCGCGGTGCAGGGCCAGGGGAAGATCATCCCCACCCC
GGTGCGCACGCTGCCCCGGGACGTGGAGAAGGGCCACGAGGTGCTCCTGGACGACGGCAGGGTGCGCCTGCGCGTGCTGA
AGGTGAGCGGCCAGGATGTGTCCTGCCGCGTGGAGGTGGGAGGGCTCCTCAAGGACCACAAGGGGCTCAACCTGCCCGGC
ACGGCCATGTCGGTGCCCACGCTGACGGAGAAGGACAAGGTGGACCTGGCGTTCGGCCAGGAGGTGGGCGTGGACTACGT
GGCGCTGTCCTTCGTGCGCTCCGCCCAGGACGTGCGCCAGGCGCGGGCGCTGGTGGCGAAGGGCAAGACGCCCATCATCT
CCAAGATTGAAAAGCCCCAGGCGGTGGAGAACCTGGACGCCATCGCCAGGGAGTCGGACGGGGTGATGGTGGCCCGCGGC
GATCTGGGCGTGGAGATGCCGCTGGAGCAGCTGCCCGCCATCCAGAAGCGCGCCGTGCGCGAGGTCAACCGCCTGGGCGG
CATCGTCATCGTCGCCACGGAGATGCTGGAGAGCATGGTGCTCAACGCCCGGCCCACGCGCGCGGAGGTGTCGGACGTGG
CCAACGCCATCCTCGACGGCGCGGACGCGGTGATGCTCTCCGGCGAGACGGCCGCGGGCCGCTACCCCGTGGACGCGGTG
GCCACCATGGCGCGCATCGTGGAGGAGACGGAGCGCACCGGCCTCATCACCCTGCCCCACTCCCCCTTCGAGCGCTCCGA
GGACCTGGGCACCGGCGTCGCCGCGGCGGCGGTGGCCGCGTCCCGGCAGCTCAACATCGGGACCATCATCGCGTACACGG
AGAGCGGCCACTCCGCGCGGCTCATCTCCGAGTTCCGCCCCGGCGCGCGCATCCTCGGCCTGACGCCCAACGCGGACACG
GTGAACCGGATGGCGCTGTACTGGGGCGTGACGGGCCACCTGGTGAAGCGCGTCAGCAGCACGGAGGCCATGCTCAAGCA
GGTGCGCCGGCTCTGTCAGGAGCTGCGCTTCTGCGAACCCGGCGCACCCTTCATCCTGGTGGCCGGCGTGCCGCTCAACG
TGCCGGGCAACACCAACATGATGAGCATCCACCGCATCTGA

Protein sequence :
MRKAKIICTLGPASDSKEVIEGLVKAGMNVARLNFSHGTHDEHRQRVQRIRAASKKLGVPVAILQDVQGPKVRLGRFEGG
QLMVTAGDTVTVTTRAVQGQGKIIPTPVRTLPRDVEKGHEVLLDDGRVRLRVLKVSGQDVSCRVEVGGLLKDHKGLNLPG
TAMSVPTLTEKDKVDLAFGQEVGVDYVALSFVRSAQDVRQARALVAKGKTPIISKIEKPQAVENLDAIARESDGVMVARG
DLGVEMPLEQLPAIQKRAVREVNRLGGIVIVATEMLESMVLNARPTRAEVSDVANAILDGADAVMLSGETAAGRYPVDAV
ATMARIVEETERTGLITLPHSPFERSEDLGTGVAAAAVAASRQLNIGTIIAYTESGHSARLISEFRPGARILGLTPNADT
VNRMALYWGVTGHLVKRVSSTEAMLKQVRRLCQELRFCEPGAPFILVAGVPLNVPGNTNMMSIHRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-72 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-72 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-72 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-72 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk1 YP_005370494.1 pyruvate kinase VFG0479 Protein 1e-72 44