Gene Information

Name : dhbE (COCOR_04375)
Accession : YP_005370345.1
Strain : Corallococcus coralloides DSM 2259
Genome accession: NC_017030
Putative virulence/resistance : Virulence
Product : 2,3-dihydroxybenzoate-AMP ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5498605 - 5500248 bp
Length : 1644 bp
Strand : +
Note : -

DNA sequence :
GTGAGCACCTCGCGGGAACACCTGCCCGGCTGCCCCACGTGGCCGGAGGACTTCGCCCGGCGCTACCGCGAGGCCGGCTA
CTGGCGCGGGGAGACCTTTGGCCAGCTCCTGCGCGACCGCGCCCGGGACTTCGGGGCGCGCGTGGCGCTGGTGGGCGGCT
CGCACCGCTGGACGTACGCGGAGCTGGACGCGCGCGTGGACCGCATGGCCGCGGGCTTCCACGCGCTGGGCATCCGCGCG
CGCGACCGCGTGGTGGTGCAGCTGCCCAACGTGCCGGAGTTCTACGAGGTCATCTTCGCGCTGTTCCGCATGGGCGCGCT
GCCGGTGTTCGCGCTGCCGGCGCACCGCGCGTCGGAGATCGGCTACTTCTGCGAGTTCACGGAAGCCGTCGCGTACGTCA
TCCCGGACCGCTTCGGTGGCTTCGACTACCGGGGGCTCGCGGCGCAGGTGAAGGCCGCCACGCCCACGCTCAAGCATGTG
CTGGTGCTGGGTGACGCGGGTGCGCATACCGCGCTGGCCTCCGTACCCGCGGAGCCCATGAAGCTGGAGGCGCTGGAGGG
CCCTTCGCCGTCCGACGTGGCGTTCTTCCAGCTGTCCGGCGGCAGCACCGGCGTGCCCAAGCTCATCCCGCGCACGCACG
ACGACTACATCTACAGCCTGCGCGCCAGCGTGGACGTGTGCCAGTTCACCGCCGAGACGGTGTACCTGTGCGCGCTGCCG
GCGGCGCACAACTTCCCCATGTCCTCGCCCGGCGTGCTGGGCACGTTCTACGCGGGCGGCACGGCGGTGATGGCGCTGAA
CCCCAGCCCGGACGTGGCCTTCCCGCTCATCGAGCGCGAGCGCGTCACCGTCACCGCGCTGGTGCCGCCGCTGACCATGG
TGTGGCTGGACTCGACGCTGGCGAAGAAGCACGACCTGTCCAGCCTGAAGGTCCTCCAGGTGGGCGGCGCCCGGCTGAGC
GACGAGGCCGCCGCGCGCGTGCGCCCCTCGCTGGGCTGCGGGCTCCAGCAGGTCTTCGGCATGGCCGAGGGCCTGGTGAA
CTACACGCGGCTGGACGACCCGGAGACGCGCATCGTCACCACGCAGGGCCGCCCCATGTCGGACGCGGACGAGCTGCGCG
TGGTGGACGACGACGACGTGCCCGTGGCGCCCGGCGAGACGGGCCACCTGCTCACGCGCGGGCCGTACACCATCCGCGGC
TACTACAAGGCGGACGCGCACAACGCGAAGGCCTTCACCTCGGACGGCTTCTACCGCACGGGCGATCTGGTGCGCCTGAC
GCCGGAGGGCGACCTGGTGGTGGAGGGCCGCGCGAAGGATCAGATCAACCGGGGCGGAGACAAGGTCGCGGCGGAGGAGG
TGGAGAACCACCTGCTCGCCCACCCTTCCGTGAGCGACGCCGCGGTGGTGGCCATCCCGGACAAGTTCCTGGGAGAGCGC
ACCTGCGCCGTCGTCATCCCCCGCGGCGAGGCCCCCGCCCCCTCCGCGCTCAACGCCTTCCTGCGCCAGCGCGGCCTGGC
GTCGTTCAAGATCCCCGACCGCATCGAGTTCGTCGCGGCCTTCCCGCAGACGGGCGTCGGCAAGGTCAGCAAGAAGGCGC
TGCGCGACAGCCTGCGCCAGTCCCTCTCCACTCCTTCTCCCTGA

Protein sequence :
MSTSREHLPGCPTWPEDFARRYREAGYWRGETFGQLLRDRARDFGARVALVGGSHRWTYAELDARVDRMAAGFHALGIRA
RDRVVVQLPNVPEFYEVIFALFRMGALPVFALPAHRASEIGYFCEFTEAVAYVIPDRFGGFDYRGLAAQVKAATPTLKHV
LVLGDAGAHTALASVPAEPMKLEALEGPSPSDVAFFQLSGGSTGVPKLIPRTHDDYIYSLRASVDVCQFTAETVYLCALP
AAHNFPMSSPGVLGTFYAGGTAVMALNPSPDVAFPLIERERVTVTALVPPLTMVWLDSTLAKKHDLSSLKVLQVGGARLS
DEAAARVRPSLGCGLQQVFGMAEGLVNYTRLDDPETRIVTTQGRPMSDADELRVVDDDDVPVAPGETGHLLTRGPYTIRG
YYKADAHNAKAFTSDGFYRTGDLVRLTPEGDLVVEGRAKDQINRGGDKVAAEEVENHLLAHPSVSDAAVVAIPDKFLGER
TCAVVIPRGEAPAPSALNAFLRQRGLASFKIPDRIEFVAAFPQTGVGKVSKKALRDSLRQSLSTPSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 1e-110 50
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-110 50
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 5e-111 50
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 6e-111 50
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 6e-111 50
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 6e-111 50
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 6e-111 50
ybtE CAA21394.1 - Virulence HPI Protein 6e-111 50
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 6e-111 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dhbE YP_005370345.1 2,3-dihydroxybenzoate-AMP ligase VFG0168 Protein 4e-136 55
dhbE YP_005370345.1 2,3-dihydroxybenzoate-AMP ligase VFG0932 Protein 5e-120 50
dhbE YP_005370345.1 2,3-dihydroxybenzoate-AMP ligase VFG1817 Protein 1e-112 48