|
Name : clpC (COCOR_03200) Accession : YP_005369176.1 Strain : Corallococcus coralloides DSM 2259 Genome accession: NC_017030 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 3912602 - 3915277 bp Length : 2676 bp Strand : + Note : - DNA sequence : ATGGCCAACCTTTGTCAGCTCTGCCAGCAACGCCCCGCGACTACGCGGGTGACGCGGGCTGTGGGCAACCGGAGGACGAC CGAGGAGCTGTGTGACGTATGCGCCAGCCAGCGCTCGCGCTTCGGGCGCGTAGGACTGGGCACGTCACTGTTCGACCAGT TCTTCAGCGGCTTCGACGACGAGGACTTCGGGGGCCTGCGCGGAACACCCGAGGCCATCCGGCAGCCGGTGGAGCGCTAC GACATCACCGAGGCCTTCTCGGAGGACACCCGCCGGGTGCTCGCCTCGGCCTTCGAGGCAGCGCAGAAGGCGGGCGCACC CGCCATCGACACCGAGCATCTCCTGGTGGCCATCGCACGGGACCCGGGCGGCCAGGAGGTACTCACCCGCCTGAAGATGG ACCCGGCCCGGGTGGCCCAGCGCGCCGAGGCGGAGATGCGAAGGGGCAAGCGGCCCATGGAGCGGCCCGAGCTGTCGCCC CACGCCAAGCGCGCGTTGGAGCTCGCCTACGAGGAGGCCTACGCGCTCGGCCACTCCTACGTGGGCCCGGAGCACATGCT GCTGGGCCTGCTGCAGGAGGGCGAGGGGACGGCGTCGGAAATCCTGCGGGAGCTGGGCGTCAAGCACCAGGACGCGCGCG AGGCCGTCAAGGACGCGCTCGCCCCGGGTGCGGAGAAGAAGCGGTCGGACACGCCCACCCTGGACGAGTACTGCCGGGAC CTGACGCAGCTGGCCTCCGAGGGCAAGCTGGACCCGGTGGTGGGGCGGGCGAACGAAATCGAGACCACGCTGGAAATCCT CTCCCGCCGCACGAAGAACAACCCCTGCCTCATCGGCGAGCCGGGCGTGGGCAAGACGGCCATCGCCGAGGGCATCGCCC AGCGCATCACCTCCCAGTCCGTGCCCGACACGCTGCGCGACAAGCGCGTGATGCAGTTGGACCTCTCCGCACTGCTGGCG GGCAGCAAGTACCGCGGTGAGTTCGAGGAGCGGCTCAAGAAGGTGATGGACGAGGTGAAGGGCCACAGCGAGGAAATGAT CCTCTTCATCGACGAGGTGCACACCCTCGTGGGGGCGGGCGCCGCCGAGGGCGCCATGGACGCCGGCAACATGCTCAAGC CGGCGCTGGCCCGCGGGGAGCTGCACGTCATCGGGGCCACGACCCTCAACGAGTACCGCAAGAACATCGAGAAGGATGCG GCGCTCGAGCGCCGCTTCCAGCCGGTGCTGGTCCCCGAGCCCACCCCGGAGCAGGCCATCGAGATCCTCGAGGGCCTCAA GGACCGCTACGAGTCGCACCACCGCGTGCGCATCAACGATGAGGCCATCGTGGCCGCGGTGGAGCTCTCCGACCGCTACA TCCAGGGACGCTTCCTGCCGGACAAGGCCATCGACCTGGTGGACCAGGCCGCGGCGCGCGTGCGGCTGAGGCAGACGGCG CGCCCCCAACGGCTGACCAACGCCGAGCACTCGGTGGCGAAGGCGCAGCGCTCGCTCGCCGAGGCGCGTGACCGCAAGGA CACGAAGCGCGCCCAGGAGTGCGAGGTGAGGCTGAAGGAGGCGAAGAAGGAGGAGTCGGTCGCGCAGAAGGAGTGGAAGT CCGCCAAGCGTGAGGAGACGCCGGAGGTGACGGACAGGGACATCGCCGAGGTGCTCTCGCGGATGACGGGCATCCCCGTC ACCCAGATGACCGAGGATGAGCGCAAGAAGCTCATGTACCTCGAGCAGCGGCTGCACGAGCGCGTCATCGGCCAGGACGA GGCCATCCGTGCGCTCTCGCAGGCCATCCGCCGGGCGAGGGCCGGGCTGAAGGACCCGAACAAGCCCATTGGCTCCTTCT TCTTCCTGGGCCCCACGGGCGTCGGCAAGACGGAGCTGGCCAAGACCCTGGCCGAGCTGATGTTCGGGGAGGAGAAGGCG CTCATCCGTTTCGACATGAGCGAGTACATGGAGAAGCACACCGTGAGCCGGCTGGTGGGCGCCCCTCCAGGCTACGTCGG CTACGAGGAGGGCGGTCAGCTGACCGAGGCCGTGCGGCGCCGCCCCTACGCGGTGCTCCTGTTCGACGAGGTCGAGAAGG CCCACCCTGACGTGTTCCACATCCTGCTGCAGGTCCTCGACGACGGGCGGCTCACCGACGCCCAGGGCAAGGTCGTCAGC TTCAAGAACACAGTCATCATCGGCACGAGCAACCTCGGCTCCAAGAGCATCCAGGAGGCGACCGAGCGCAAGGAGCCGCA GGACCGCATCCGCGAGCGGGTGATGTCCGTGCTGAAGGGGCACTTCCCGCCGGAGTTCCTCAACCGCATCGACGAGGCGG TGATGTTCGAGCCGCTCAACCGCGCGCAGATCCGTGAGATCGTCAACCTGATGCTCGAGAGGACGCGGCGCCTGCTCCAC GGGCAGGCCATCCAGATGGAGGTGACGCCCGCCGGCATCGACGCGCTGCTGGAGCGTGGGTGGGACCCCACCTACGGGGC CCGGCCGATGCGGCGCGAGATCCAGCGCTCCATCGAGGGCCCCATCTCCGAGTCCCTCATCAGCGGCAAGCTGCGCGAGA ACAGCCGGGTGCGCGTCGACTTCCGCGAGGGTGCGTTCAAGTTCGAGGAGGTGGAGACCGTGGAGGAGCGGCCGGAGCGG CCCGCCGCGGAGGAGCAGCCTCCAGCGGTCCACTGA Protein sequence : MANLCQLCQQRPATTRVTRAVGNRRTTEELCDVCASQRSRFGRVGLGTSLFDQFFSGFDDEDFGGLRGTPEAIRQPVERY DITEAFSEDTRRVLASAFEAAQKAGAPAIDTEHLLVAIARDPGGQEVLTRLKMDPARVAQRAEAEMRRGKRPMERPELSP HAKRALELAYEEAYALGHSYVGPEHMLLGLLQEGEGTASEILRELGVKHQDAREAVKDALAPGAEKKRSDTPTLDEYCRD LTQLASEGKLDPVVGRANEIETTLEILSRRTKNNPCLIGEPGVGKTAIAEGIAQRITSQSVPDTLRDKRVMQLDLSALLA GSKYRGEFEERLKKVMDEVKGHSEEMILFIDEVHTLVGAGAAEGAMDAGNMLKPALARGELHVIGATTLNEYRKNIEKDA ALERRFQPVLVPEPTPEQAIEILEGLKDRYESHHRVRINDEAIVAAVELSDRYIQGRFLPDKAIDLVDQAAARVRLRQTA RPQRLTNAEHSVAKAQRSLAEARDRKDTKRAQECEVRLKEAKKEESVAQKEWKSAKREETPEVTDRDIAEVLSRMTGIPV TQMTEDERKKLMYLEQRLHERVIGQDEAIRALSQAIRRARAGLKDPNKPIGSFFFLGPTGVGKTELAKTLAELMFGEEKA LIRFDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPYAVLLFDEVEKAHPDVFHILLQVLDDGRLTDAQGKVVS FKNTVIIGTSNLGSKSIQEATERKEPQDRIRERVMSVLKGHFPPEFLNRIDEAVMFEPLNRAQIREIVNLMLERTRRLLH GQAIQMEVTPAGIDALLERGWDPTYGARPMRREIQRSIEGPISESLISGKLRENSRVRVDFREGAFKFEEVETVEERPER PAAEEQPPAVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005369176.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 51 |
| clpC | YP_005369176.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 1e-144 | 48 |
