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Name : lysS (COCOR_02664) Accession : YP_005368647.1 Strain : Corallococcus coralloides DSM 2259 Genome accession: NC_017030 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 3305639 - 3307198 bp Length : 1560 bp Strand : + Note : - DNA sequence : ATGGCCGACACCGAGAACAAGACCCCCCCAGGTGAGAAGAGCGGCGAAGCGGCGGACTCCAGCTCCAAGGAGCAGGAGAT CTACCAGCAGCGGTTGGACAAGGCCGAGAAGTGGCGCGAGGCCGGCTTCAACCCCTACGGCAACGGCTACGCCCCGAAGC ACCGGGCCGCGGACATCCTGGCCACGCACGCCAACCACTCCATGGAGGACCTGGAGAAGGACGCGCCCGTCTACGACGTC GCCGGCCGCATCGTGGCCATGCGCTCGTTCGGCAAGGCCGCCTTCATCAAGCTGCGCGACCGCTCCGGGGAAATCCAGGC GCACGTGAAGAAGGACGCGCTCGGGGACCTCTATGAGGTCTTCAAGCAGTGCGACCTGGGCGACTTCGTCGCTGTGCAGG GCCCCGTCTTCCGCAGCAAGACGGGCGAACTGTCCCTGTCCGCCACGAAGTTCGTGCCCCTCACCAAGTCCCTGCGCCCC CTGCCGGAGAAGTGGCATGGCCTCACGGACGTGGAGGTCCGCTACCGCCAGCGCTACCTGGATCTCGTCTCCAACCCGGA CGTGAAGCAGGTCTTCTTGAAGCGCAGCAAGTTGGTGAAGTTCATCCGGAGCTTCCTCGACGGGCGCGACTTCGTCGAGG TGGAGACCCCGATGATGCACCCGCTGGTGACGGGTGCGGCGGCGCGGCCGTTCATCACGCACCACAACACGTACGACATC GACCTCTACATGCGCATCGCGCCCGAGCTCTACCTGAAGCGGCTCGTGGTGGGCGGCATGGATCGCGTCTACGAAATCAA CCGCAACTTCCGCAACGAGGGCATCAGCACCCGGCACAACCCGGAGTTCACGATGCTGGAGTTCTATCAGGCGTACGCCA CGTACGAAGACCTGATGGACCTCACGGAGGAGATGCTCTCGGAGGCCTCCCGCCACGTCACCGGCGACTCCAAGGTGAAG TACGGCGAGCACGTCATCGACTTCGGCAAGGGCTGGAAGCGCATCCCCATGCCGGAGGCCATCCGGGAAGCCGTCCCCGG CCTGTCCGACAAGGACATGGTGGACGTGGACCGCCTGCGCCATGAACTGCTCAAGACGGTGCACTCGGAGGTGGAGCGCC GCGCCGTGGACGCCATGAACCACGGTGAGCTGGTGGGCGCCCTCTTCGAGGCCCACGTCGAGCACACGCTCATCCATCCC ACCTTCATCACCCAGTATCCCACCGCCGTCTCCCCGCTCGCCCGCCGCAACGACCAGAACCCGGAAATCACGGACCGGTT CGAGCTCTTCGTCGCGGGCCGGGAAATCGCCAACGCCTTCTCCGAGCTGAACGACCCCCTGGACCAGAAGGGCCGCTTCC AGGCCCAGCTGGACGCGAAGCAGCGGGGCCAGCAGGAGACCATGGACTACGACGAGGATTACATCCGCGCCCTCGAACAC GGCATGCCGCCCACGGCCGGTGAAGGCATCGGGATTGATCGCGTCGCCATGTTGTTCACGGACGCCGCCAGCATTCGTGA CGTGATTCTCTTCCCCCTCCTCAAGCCGCTGGCGAAGTAG Protein sequence : MADTENKTPPGEKSGEAADSSSKEQEIYQQRLDKAEKWREAGFNPYGNGYAPKHRAADILATHANHSMEDLEKDAPVYDV AGRIVAMRSFGKAAFIKLRDRSGEIQAHVKKDALGDLYEVFKQCDLGDFVAVQGPVFRSKTGELSLSATKFVPLTKSLRP LPEKWHGLTDVEVRYRQRYLDLVSNPDVKQVFLKRSKLVKFIRSFLDGRDFVEVETPMMHPLVTGAAARPFITHHNTYDI DLYMRIAPELYLKRLVVGGMDRVYEINRNFRNEGISTRHNPEFTMLEFYQAYATYEDLMDLTEEMLSEASRHVTGDSKVK YGEHVIDFGKGWKRIPMPEAIREAVPGLSDKDMVDVDRLRHELLKTVHSEVERRAVDAMNHGELVGALFEAHVEHTLIHP TFITQYPTAVSPLARRNDQNPEITDRFELFVAGREIANAFSELNDPLDQKGRFQAQLDAKQRGQQETMDYDEDYIRALEH GMPPTAGEGIGIDRVAMLFTDAASIRDVILFPLLKPLAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-109 | 47 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-79 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005368647.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-109 | 47 |
