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Name : cmlA (COCOR_02270) Accession : YP_005368258.1 Strain : Corallococcus coralloides DSM 2259 Genome accession: NC_017030 Putative virulence/resistance : Resistance Product : Bcr/CflA family protein drug resistance transporter Function : - COG functional category : - COG ID : - EC number : - Position : 2731627 - 2732814 bp Length : 1188 bp Strand : + Note : - DNA sequence : ATGTCTGACCCCAAAGCCCTGTCGTGGAATCACACCGTGCCAGCAGCGCTGTTGCTGATGGCCCCCTTCGACCTCCTGGC CTCGCTGGCCATGGACATCTACCTCCCCGTGGTCCCGGCCATGACCGGAGTCCTCGGCACCTCTCCCTCCATCATCCAGC TCACGCTGAGCCTCTACATGGCCATTCTCGGGGCCGGGCAGCTGGTGTTCGGCCCGCTCTCCGACCGCATCGGCCGGCGC AGGGTGTTGCTGGGGGGCGCGTGGGTGTTCGCGACCACCTCCTTCCTGCTCGCGGGCACCACCGATGCCGCGATGTTCGT CGGGCTCCGGCTCCTGCAAGCCGTGGGGGCCTCCGCGGCGCTCGTCGCGACGTTCGCCACCGTCCGGGACGTCTATGCGG AGCGGCCCGAAGGCACGGTCATCTACAGCCTGTTCAGCGCCATTCTGGCCTTCGTTCCGGCACTGGGCCCCATCGCCGGG GCCCTGCTCGCGCGGCACTTCGGATGGCGGGCCCTCTTCGTCACGCTCGGCGTCCTGGCGACGGCGGCGTTGCTCCAGGC CCTGCCGCGCTGGCCTGAGACACGTCCCTCCGGCGTGGCCCGTCAGACGGTGTCCGTCCAGCACATCCTGCGCAGCGGCG CGTTCTGGACGTACACGCTGGGCTTCAGCGCGGCCATGGGCTCCTTCTTCGTGTTCTTCTCCACGGCGCCCCGGGTGCTC ATGGGACGGGCCGGCTTCTCGGAGCTTGGCTTCAGCCTGGCCTTCGCCACCGCCGCGCTGGCCATGATGGTGACCACGCG CTTCGCGAAGCACCTCGTGGCCCGCTGGGGGCTGGCGGGAAGCCTTGCCCGCGGCATGCTCCTGCTGCTGCTGGGCGCGG TGTTGCTCACCGCCGGGCAGCTCCTCACGGCGCCGTCCTTCTGGACGTTCGTCGTGCCCATGTGGGTCATCGCCGCGGGG ATTGTCTTCGCCGTCTCCGTCACCGCCAATGGCGCGCTCCAGGCCTTTGGCGCCGTGGCGGGAACGGCGGTCGCGCTCTA CTTCTGCATCCAGAGCCTCGTCGTCGCCGTCGTGGGGACCCTGATGGTCGTCCTGCTCGACGGCGACACCGCGTGGCCCC TGGTGGGGTACGCCTCGCTCATGGCGGGGGTGACGTTGGGCTGCCTGGCATCCTTCAAGCGCCCCTAG Protein sequence : MSDPKALSWNHTVPAALLLMAPFDLLASLAMDIYLPVVPAMTGVLGTSPSIIQLTLSLYMAILGAGQLVFGPLSDRIGRR RVLLGGAWVFATTSFLLAGTTDAAMFVGLRLLQAVGASAALVATFATVRDVYAERPEGTVIYSLFSAILAFVPALGPIAG ALLARHFGWRALFVTLGVLATAALLQALPRWPETRPSGVARQTVSVQHILRSGAFWTYTLGFSAAMGSFFVFFSTAPRVL MGRAGFSELGFSLAFATAALAMMVTTRFAKHLVARWGLAGSLARGMLLLLLGAVLLTAGQLLTAPSFWTFVVPMWVIAAG IVFAVSVTANGALQAFGAVAGTAVALYFCIQSLVVAVVGTLMVVLLDGDTAWPLVGYASLMAGVTLGCLASFKRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 2e-87 | 68 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 2e-87 | 68 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-86 | 67 |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-86 | 67 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-86 | 67 |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 4e-86 | 67 |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 2e-66 | 51 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 2e-66 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cmlA | YP_005368258.1 | Bcr/CflA family protein drug resistance transporter | DQ984668.gene.p01 | Protein | 1e-66 | 51 |
| cmlA | YP_005368258.1 | Bcr/CflA family protein drug resistance transporter | AF294653.1.gene4.p01 | Protein | 9e-67 | 51 |
| cmlA | YP_005368258.1 | Bcr/CflA family protein drug resistance transporter | DQ522237.1.gene4.p01 | Protein | 1e-66 | 51 |
| cmlA | YP_005368258.1 | Bcr/CflA family protein drug resistance transporter | NC_010410.6003586.p0 | Protein | 1e-66 | 51 |
| cmlA | YP_005368258.1 | Bcr/CflA family protein drug resistance transporter | AF156486.gene.p01 | Protein | 4e-65 | 50 |
