Gene Information

Name : insN1 (COCOR_01920)
Accession : YP_005367923.1
Strain : Corallococcus coralloides DSM 2259
Genome accession: NC_017030
Putative virulence/resistance : Unknown
Product : IS3 family transposase OrfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2298369 - 2298683 bp
Length : 315 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGGAGAGCGAGAAGAAGCAGAGGCGGCAGCGGCGTAGCTTCCGCCCAGAGTTCAAGGCCGGGGCCGTGAAGCTGGT
GCTGGAGGAGGGCAAGTCCGTCGCGGCGGTGGCGCAGGACCTGGACCTGACCGAGACGGCCCTCCGCAAGTGGGTGGAGC
AGTCGAAGGCCGACAAGGGCCAGGGCAAGCCGGGTGCGCTCACCAGCGAGGAGCGGGTGGAACTCTCCGGGCTGCGCAAG
CGCGTGCGCCAGCTCGAGATGGAGCGAGACCTGCTAAAAAATGCGGCGGCCTTCTTCGCGAAGGAGATGAAGTGA

Protein sequence : 
MSESEKKQRRQRRSFRPEFKAGAVKLVLEEGKSVAAVAQDLDLTETALRKWVEQSKADKGQGKPGALTSEERVELSGLRK
RVRQLEMERDLLKNAAAFFAKEMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 5e-10 42
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 5e-10 42
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-10 42
unnamed AAF09021.1 unknown Not tested SHI-O Protein 1e-09 42
unnamed AAF09029.1 unknown Not tested SHI-O Protein 1e-09 42
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 5e-10 42
unnamed BAC67553.1 hypothetical protein Not tested Type-IVc SCCmec Protein 2e-10 42
SAR0081 YP_039548.1 transposase Not tested Type-II SCCmec Protein 3e-10 42
ORF SG13 AAN62235.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-08 42
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 2e-09 41
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 3e-07 41
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 3e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insN1 YP_005367923.1 IS3 family transposase OrfA VFG1707 Protein 2e-10 42