Gene Information

Name : hemC (MCE_05405)
Accession : YP_005365569.1
Strain : Candidatus Rickettsia amblyommii GAT-30V
Genome accession: NC_017028
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 937451 - 938527 bp
Length : 1077 bp
Strand : -
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGACAAATTCTATCAGAATAGGTACAAGAAAAAGTCCACTTGCTTTAATACACACTAATTTAGTTATTCAGCAAATCAA
ACAATTTTGTCCTGATATTAATTTTGAAATAGTGCCGATTATTACTAGCGGGGATTTAATCCAAAATAAACCATTATACG
ATATAGGCGGTAAAGCTTTATTTTTAAAGGAAATAGAACAAGCCTTGCTTGATAAAAAAATTGACTTAGCTGTTCATTCT
TTAAAAGATGTACCGGGTAGAATACCTGAACCGCTAGTAATAGCTGCTGTTTTAGAGCGTGAAGACCCCAGAGATGTTTT
TGTTTGTCTAAAATATAAATCTATAGAAGAGCTGCCGCAAAATGCCGTAATAGGTAGCTCGGCAGTACGAAGAAAAGCAT
TTATCCAAAAAATAAGACCGGATTTAAAGGTAACGGTTTTTAGAGGGAATGTTGATTCAAGAATGAAAAAGCTAATGACC
GGCGAAGTTGACGCAACAATTTTAGCATATACAGGTCTTAAAAGGTTAGAGGCGTTTAATCCGGAGTATTGCCATTTGAT
AGAGTATTCACAGATGTTACCGTGTATAGGGCAGGGAGTCATTGCAGTTGAGATTAGAAAAGACGATAATGCTATGCTTG
AGATATGCAACAAAATTAATCATCTTCCCACTTTTGAACTAATAAAACCCGAAAGAGCATTTTTAGAGTATCTAGATGCT
AATTGCCGCACTCCGATTGCTGCTTATTCACAATATCTAGATGCAGATCCTAGACATCTTTCCAAACTCGCTTATCGGGA
GGCATTTGAAGGCAACACGGAAACACTTGCCACCGCAGCGTACAAAAACGATCGTACAGATGCAAGTACCGGATTGACGT
ACAAATTACCCCTAGAAGTAGAGTTTGGGAAGATGTCTAATATACAAACCGATTTTATGCTCGGTAACCTTGACGGCAGT
AAAATAACTTTCCATACCGAAACTACCAATATAAAAACTTCAACAGAAGCAGGCATAAAAGCCGCTAAAATGATGTTGGA
AGCTATCTGTAAATCAACTAGACAAATAGATATTTAG

Protein sequence :
MTNSIRIGTRKSPLALIHTNLVIQQIKQFCPDINFEIVPIITSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHS
LKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRMKKLMT
GEVDATILAYTGLKRLEAFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNKINHLPTFELIKPERAFLEYLDA
NCRTPIAAYSQYLDADPRHLSKLAYREAFEGNTETLATAAYKNDRTDASTGLTYKLPLEVEFGKMSNIQTDFMLGNLDGS
KITFHTETTNIKTSTEAGIKAAKMMLEAICKSTRQIDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-46 45
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-46 45