Gene Information

Name : smpB (MCE_03865)
Accession : YP_005365328.1
Strain : Candidatus Rickettsia amblyommii GAT-30V
Genome accession: NC_017028
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 676133 - 676591 bp
Length : 459 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGACCGAATATAAGAAAGTTATTGCACAAAATAAGAAAGCCCTTTTTAATTATTTTATTGAAGAAAGATTAGAAGCGGG
TATTGTATTAAAGGGTAGTGAAGTACAGTCTCTGCGTCAAGGCAAAGCTTCTATAGCAGAAAGTCATGCGGCAGATATCG
GACATGAGGTATTTTTGTATAACTGCCATATTGCAGAATATGAAAAAGCGAATAGATTTAATCATGCTACTCGTAGACCG
CGTAAGTTATTGTTGCATACTAAAGAGATAAAGAAAATTATCGGTAGAATTAGAATAAAAGGCTATACGCTAGTAGCTCT
TTCTATGTATTTTAATAAAAAAAATAAAGTGAAAGTTGAACTTGGTATTGCTAAAGGTAAGAAATTACATGATAAAAGAG
AGTCAATTAAAGAAAAAGACTGGAAAAGAGATCAGAGCAGATTAATAAGACAGAAGTAA

Protein sequence :
MTEYKKVIAQNKKALFNYFIEERLEAGIVLKGSEVQSLRQGKASIAESHAADIGHEVFLYNCHIAEYEKANRFNHATRRP
RKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGIAKGKKLHDKRESIKEKDWKRDQSRLIRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 8e-23 48
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 9e-20 48
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-18 46