|
Name : phyA (PMCN06_0842) Accession : YP_005363262.1 Strain : Pasteurella multocida HN06 Genome accession: NC_017027 Putative virulence/resistance : Virulence Product : PhyA,Capsule polysaccharide export protein Function : - COG functional category : - COG ID : - EC number : - Position : 909850 - 911907 bp Length : 2058 bp Strand : - Note : - DNA sequence : ATGTATCAAGAGTTTCTTATTTTTTCTAAAGGGATGTTAAAAATTCCTTATTTAAGCGGTTTTTTTACCCAACGCTTAAA AATGTTCTCTCCGTTTGTCACATGGAAAAAGGAGAGAACATGTATTTTAGAATGGGGATATAAAGCATCATCAAAGAAGG CGAGATATTTTGCACAACAACATGATTTACCTTATGCGACGATAGAAGATGGTTTTTTACGTTCTATTGGACTGGGTGTG GATGGGTATCCACCTTTCTCATTAGTGTACGATGATATTGGTATTTATTATGATATCAATCAGCCTTCTCGTTTAGAAAA CTTAATTCTTTCTCAGGATGTATTGCTTCAGGAGCAAGTCGATCAAGTTAAATATGCAATTGAATTAATTTGTACACATA ACCTTTCCAAATATAACCACGCGATTGATACACCTTTACAGAATACGAAGAGGCCGATTGTCTTAGTCGTTGATCAAACA TATGGCGATATGGCAGTTACTTTCGGGAATGCTGGACAAGGTGATTTTCTACACATGTTAGAGCGTGCGATTATTGAAAA TCCAACAGCAGAAATCTGGTTAAAAATCCATCCTGATGTAATGTGTGGTAAAAAACAAGGCTATTTAACGGAATATCAGC AATTTCCAAGAGTAAAAGTATTATCAGAAGATTTTAATTCTATCTCACTACTAAAGCATGTTGATAAAGTTTATTGCGTG ACATCTCACACTGGGTTTGAGGCCCTTTTGTTAGGAAAAACCGTCGTGACTTTTGGGGCAGCTTGGTTTTCTGGTTGGGG ATTGACGGATGATCGGCATGCGTATATTCGTCAGCTAAAACAGAGTAAGAGAAGAGCGAAGCGTTCATTTTTGCAGTTAT TCTATTCAGCTTATTTCCAATATTGTCGTTATATTAATCCTAATACGGGTAAATCTGGCACATTGTTTGATGTCATTGAT TATCTTATTCAAGCAAAAAAAGTAACTAATCAATTAGCGGGTGATATTTATTGTGTCGGTATGCGTTTTTGGAAACGCAA AGTGGTTCAGCCCTTTTTTCAATTTCCGCGCTGTCGTTTACATTTTGTGCAAAATATTCATGAGCTAAAGCGATGTATCC GTGATAAATCTCAAGCTAAAGTGGTGGTGTGGGGACATTCACACAGTGAAGAGGTTGAATACGCCAAACAACAGCAGCTT CCTCTTTTGAGAATGGAAGATGGTTTTTTACGTTCTATTGGATTGGGGTCTAATTTAACGCCACCGATATCCTTGGTCTT AGATGACGTTGGCATTTATTTTGATGCTCAATCTCGTTCCCGATTAGAGGATATTCTGCAACATCAGTCCTTTAATCTGA GGGATTTACAGCTAGCAGAGATGTTAAAAAAAACACTGATTGCGCAGCATATTAGTAAATATAATGTGGGACATACACAC TTATGCCTAACACACATCAGACAAAATAAACTTTTAGTTGTGGGACAGGTGGAAAATGATGCTTCAATTCAATATGGTTC ACCGCATATTCGTACTAATTTAGATTTATTATGTACGGTCAGAAAAAATAATCTCCAAGCCTATATTATTTATAAACCTC ATCCTGATGTGGTTGCAGGCAATCGTAAAAACACAGATCGTCTAGATGATTATCGACAGTATGCTGATTTCGTGGTTGAG AAAGCCAATATATTGGATTGCATTAACCAAGTGGATGAAGTGCATACGATGACCTCTTTAGCGGGGTTTGAAGCGTTACT GCGCGAGAAAAAAGTACATTGTTATGGCTTGCCTTTTTATTCTAACTGGGGGCTAACAGTGGATCATCTTTCTCTAAACC GAAGAAGTCGGAAGTTAAGTCTTTTAGAATTAATTGCTGGCGTGCTGATTTATTACCCACAATATATTGACCCAAAAACA AAAACAATGATCGATGTGCAGCGAGCGGTTGATATTCTGATCGAGCAACGTCGAAAAATAAAAAATAATGAATTACATAC AAATTATTTTATGAACATTTTTATGAAATTAAAAAATGTTTATTCTGTTTTGAGGTAG Protein sequence : MYQEFLIFSKGMLKIPYLSGFFTQRLKMFSPFVTWKKERTCILEWGYKASSKKARYFAQQHDLPYATIEDGFLRSIGLGV DGYPPFSLVYDDIGIYYDINQPSRLENLILSQDVLLQEQVDQVKYAIELICTHNLSKYNHAIDTPLQNTKRPIVLVVDQT YGDMAVTFGNAGQGDFLHMLERAIIENPTAEIWLKIHPDVMCGKKQGYLTEYQQFPRVKVLSEDFNSISLLKHVDKVYCV TSHTGFEALLLGKTVVTFGAAWFSGWGLTDDRHAYIRQLKQSKRRAKRSFLQLFYSAYFQYCRYINPNTGKSGTLFDVID YLIQAKKVTNQLAGDIYCVGMRFWKRKVVQPFFQFPRCRLHFVQNIHELKRCIRDKSQAKVVVWGHSHSEEVEYAKQQQL PLLRMEDGFLRSIGLGSNLTPPISLVLDDVGIYFDAQSRSRLEDILQHQSFNLRDLQLAEMLKKTLIAQHISKYNVGHTH LCLTHIRQNKLLVVGQVENDASIQYGSPHIRTNLDLLCTVRKNNLQAYIIYKPHPDVVAGNRKNTDRLDDYRQYADFVVE KANILDCINQVDEVHTMTSLAGFEALLREKKVHCYGLPFYSNWGLTVDHLSLNRRSRKLSLLELIAGVLIYYPQYIDPKT KTMIDVQRAVDILIEQRRKIKNNELHTNYFMNIFMKLKNVYSVLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 3e-174 | 54 |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 4e-124 | 45 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 3e-124 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| phyA | YP_005363262.1 | PhyA,Capsule polysaccharide export protein | VFG0704 | Protein | 4e-152 | 54 |
| phyA | YP_005363262.1 | PhyA,Capsule polysaccharide export protein | VFG0692 | Protein | 4e-174 | 54 |
| phyA | YP_005363262.1 | PhyA,Capsule polysaccharide export protein | VFG0259 | Protein | 1e-174 | 54 |
