Gene Information

Name : phyB (PMCN06_0841)
Accession : YP_005363261.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Virulence
Product : PhyB,Capsule polysaccharide export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 908614 - 909840 bp
Length : 1227 bp
Strand : -
Note : -

DNA sequence : 
ATGGATGTGCTTAAGCATAATTTAGATGAATTACTTGAATCATCAACGAACTATTTATTATTACAAGGTCCAATTGGTCC
TTTTTTTACAGAACTGTCAGCATGGCTAAAAACGTTTCATAAACAAGTATTTAAAATAAATTTTAATTCTGGTGATGAGG
CTTTTTATCCTAATTCTATTCCTCAGACTTTTGCCTACCAGGGACAGTTGGATCAGTTTGACCAGTATCTTCGTTTTTTT
TGTCACCAACATTCGATTGATGCGATCATTTGTTTTGGTGATACACGGGCTTATCATCGCATTGCTAAAATCATTGCAGA
TAAACAGAAAATTTCGTTTTGGGTTTTTGAAGAAGGCTATTTAAGACCAGAATATGTAACCCTAGAAAAAGGGGGCGTTA
ATGATTATTCGCAATTACCTCGTCATGCTAACTTCTTTTTATCACAAGCCGAGTGTTGCTCGGAGATCTCGGCACCGGAA
AAATTAGCAAAAGGCTTTATTCCATTGGCAACTATTGCGATAAAATACTATACCAAAGCCTACTTTAATCAACATAAATA
TCCTGATTATCAACATCATCGTATTTTAGATTTGAAATATTATATTAAGTTATGGCTAACTTCAGGAATAAAAAGAGCTT
ACTATTATTGGCAAGATCGTTCTTTTGGGAAGAAAGTAGCAGCGGGTAAATTAGGGGATTTTTTCCTCGTGCCTTTGCAA
GTGTATGATGATAGTCAAGTGAGAATACATTGTGACTATGAAAGTGTTGACGCTTTTTTAAAGGAAATCTTGGAGTCATT
TATTCATCATGCTCCGAGCGCACTTAATTTGATTATCAAGCATCACCCAATGGATAGGGGATTTGTCGATTATGGGCATG
TAATTAAACAATATAAAACACAATATCCCGCGTTTAAAAAGCGAATCTTTTATGTTCATGACGTTCCAACCCCCATTTTA
TTGAGAAAAGGGAAGGGAATGATTACCTTAAATAGTACAAGTGGAATTTCTGCCTTGTTACACCGTATGCCAGTTTTGAC
CTTAGGCAGAGCAAGTTACAATTTTAAAGGATTAACTTATCAAGGTAATTTGCACAGTTTCTGGCATAATAAGGCATTAC
CAGATGCGAAAGTGTTTGACGCATATCGAAAGTATCACTTATCTAAAACACAGATTAATGGGAGTTTCTATAGTAAAGTC
ATTCTACGTTATCCTTATAATCAATAA

Protein sequence : 
MDVLKHNLDELLESSTNYLLLQGPIGPFFTELSAWLKTFHKQVFKINFNSGDEAFYPNSIPQTFAYQGQLDQFDQYLRFF
CHQHSIDAIICFGDTRAYHRIAKIIADKQKISFWVFEEGYLRPEYVTLEKGGVNDYSQLPRHANFFLSQAECCSEISAPE
KLAKGFIPLATIAIKYYTKAYFNQHKYPDYQHHRILDLKYYIKLWLTSGIKRAYYYWQDRSFGKKVAAGKLGDFFLVPLQ
VYDDSQVRIHCDYESVDAFLKEILESFIHHAPSALNLIIKHHPMDRGFVDYGHVIKQYKTQYPAFKKRIFYVHDVPTPIL
LRKGKGMITLNSTSGISALLHRMPVLTLGRASYNFKGLTYQGNLHSFWHNKALPDAKVFDAYRKYHLSKTQINGSFYSKV
ILRYPYNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipB NP_273146.1 capsule polysaccharide modification protein Not tested IHT-A Protein 1e-103 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phyB YP_005363261.1 PhyB,Capsule polysaccharide export protein VFG0705 Protein 1e-138 66
phyB YP_005363261.1 PhyB,Capsule polysaccharide export protein VFG0693 Protein 1e-138 66
phyB YP_005363261.1 PhyB,Capsule polysaccharide export protein VFG0260 Protein 6e-104 54