Gene Information

Name : ribD (PMCN06_0813)
Accession : YP_005363233.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 875445 - 876572 bp
Length : 1128 bp
Strand : -
Note : -

DNA sequence :
ATGACATTTACGGCACAAGATGTAGTGTACATGCAAATGGCATTAGAGTTAGCGGAGAAAGGGCAATTTACTACTACACC
GAACCCCTCAGTGGGTTGCGTATTAGTGAAAGACGGTATTATTGTTGGACGTGGCTTTCATGTTAAAGCAGGCGAGGCGC
ATGCTGAAGTCATGGCATTGCGAGAGGCGGGAGAAAATGCACGAGGTGCAACCGCTTATGTGACATTAGAACCGTGCTCA
CATTTTGGACGTACTCCCCCTTGTGCCCAAGGTTTGATCGATGCTGGTGTAGTGAAAGTCGTGAGTGCGATGTGCGATCC
CAATCCGCAAGTGGCAGGTCGAGGATTAAGCATGTTATCTGATGCGGGGATCGAAAGTGCGGTCGGTTTATTAGCTGAAA
AGGCGGAGTGGCTTAATCGTGGTTTTCTTAAACGTATGCGTACTGGCAGACCTTATGTACAACTAAAAATGGCTATGAGT
TTAGATGGAAGAACCGCGATGGCAAACGGGGAAAGTAAGTGGATTACCGGTGAGCTTGCTCGTGCAGATGTGCAAGCAGA
ACGAGCCAAAGCCTCAGCGATTTTATCCACCAGTGCAACGGTGTTAGCTGATGATCCCTTATTAAATGTACGCTGGCAAC
AATTACCTGACAAGGTGAAAGCCGATTATACACAAGCGCAGCTACGTCAACCTGTGCGAGTGATTTTAGATTCTCAACAT
CGAGTTCAACCCTCACGCCGACTTTTCAGTCTGTCTTCGCCAGTGTGGTTAGTGAGTCAAACTGCGCGTTCGTTACTTGA
GTTTCCTGCACATTGCGAACAAATACAGCTTTCCGCTTCTACCAACGCTTTAGCTGATTTAATGGCAGAATTAGGACAAC
GTCAAATCAATACGCTTTGGATTGAAGCCGGTGCGACATTGGCTGGTGCATTAATTGAGGCAAAATTAGTGGATGAATTG
ATCATTTACATTGCACCGAAATTATTAGGTGATGCCGCACGAGGATTATGTAAATTACCTCATTTAAGCACCTTGGCTGA
GGCAAGTTTATGGCAATTGCATTCCATTGAGAAACTCGGCGATGATCTGAAAACGATTTACCACCCACGAATTACGGAGC
CAACATGA

Protein sequence :
MTFTAQDVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGENARGATAYVTLEPCS
HFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLSMLSDAGIESAVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMS
LDGRTAMANGESKWITGELARADVQAERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH
RVQPSRRLFSLSSPVWLVSQTARSLLEFPAHCEQIQLSASTNALADLMAELGQRQINTLWIEAGATLAGALIEAKLVDEL
IIYIAPKLLGDAARGLCKLPHLSTLAEASLWQLHSIEKLGDDLKTIYHPRITEPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-63 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-63 48