Gene Information

Name : sitA (PMCN06_0419)
Accession : YP_005362845.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Virulence
Product : manganese/iron transport system substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 441974 - 442855 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTCGCTTAACTGTTATTTTAAGTGCAATTATGTTAGGTATTTTTACATCGCCTGCGTTTGCAAAATTCAAAGTTGT
CACTACGTTTACCGTGATTCAAGATATTGCTCAAAATGTTGCTGGTGATGCAGCCATTGTTGAGTCAATTACCAAACCGG
GTGCGGAAATTCATGATTATGAACCGACACCAAAAGATATCGTCAAAGCACAACATGCCGATCTCGTCTTATGGAATGGC
TTAAATCTTGAGCGTTGGTTTGAAAAATTCTTCGAAAACGTGAAAGATAAACCGGCTGTCGTTGTGACAGAAGGAATCAC
GCCAATTTCAATTTATGAAGGTCCTTACAAAGATGCACCAAATCCACATGCTTGGATGTCAACATCAAATGCCTTAATTT
ATATTGAAAATATTAAAAATGCATTGGTGAAATATGATCCGAAAAATGCCGACATCTATGTCAAGAATGCAGAAAATTAT
GCAAATAAAATCAAACAATTAGACCAACCATTACGTGAAAAACTTGCCAAAATTCCTGAAGGTCAACGTTGGTTAGTGAC
CAGTGAAGGCGCTTTCAGCTACTTAGCAAAAGATTATGGCTTACAAGAAGCGTATTTATGGCCAATTAATGCGGAAGAAC
AAGGCACACCACAACAAGTGCGTCATGTAATTGAAACAGTACGCAAAAACAATATTCCTGTGGTGTTCAGTGAAAGTACC
ATTTCGGATAAACCTGCAAAACAAGTTGCCAAAGAAACGGGAGCAAAATACGGTGGTGTACTTTATGTAGATTCCTTATC
TACTGCTAAAGGACCAGTACCAACCTATATCGATTTATTAAACACCACTGTTTCCACTATTGTTAAAGGATTTGAAAAAT
AA

Protein sequence : 
MRRLTVILSAIMLGIFTSPAFAKFKVVTTFTVIQDIAQNVAGDAAIVESITKPGAEIHDYEPTPKDIVKAQHADLVLWNG
LNLERWFEKFFENVKDKPAVVVTEGITPISIYEGPYKDAPNPHAWMSTSNALIYIENIKNALVKYDPKNADIYVKNAENY
ANKIKQLDQPLREKLAKIPEGQRWLVTSEGAFSYLAKDYGLQEAYLWPINAEEQGTPQQVRHVIETVRKNNIPVVFSEST
ISDKPAKQVAKETGAKYGGVLYVDSLSTAKGPVPTYIDLLNTTVSTIVKGFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-95 65
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-95 65
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-95 65
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-95 65
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-95 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_005362845.1 manganese/iron transport system substrate-binding protein BAC0439 Protein 2e-103 77
sitA YP_005362845.1 manganese/iron transport system substrate-binding protein BAC0349 Protein 1e-95 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_005362845.1 manganese/iron transport system substrate-binding protein VFG0525 Protein 1e-95 65