Gene Information

Name : sitB (PMCN06_0418)
Accession : YP_005362844.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Virulence
Product : manganese/iron transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 441081 - 441974 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCTCTCCTACCATTGCATCCATTTCAGTCAATGATGTCACTGTTCGTTATAACAATGGACACCTTGCAATTTATGA
TACGACCTTTAACTTAGAAGGCGGTACAACTTGTGCTTTGGTAGGTGTGAATGGCAGTGGAAAATCCACCATTTTCAAAA
GCCTAATGGGATTGGTTAAGCCACAAAAAGGCGAAATTCAACTTTGTGGTTTGCCAATTTCAGCAGCGTTGAAACAAAAT
CTCGTTGCTTATGTGCCTCAATCAGAAGATGTTGACTGGCAGTTTCCCGTTTCCGTCTATGATGTTGTGATGATGGGACG
CTATGGTTATATGAACTTTTTACGTATGCCAAAAGCGATTGACAAACAAAAAGTAAAAGAAGCCATGCAGCGCGTCAATA
TTGAACATCTTGCTGATCGCCAAATTGGTGAGTTATCTGGTGGTCAAAAAAAACGGGTGTTCTTAGCACGTGCCCTTGCC
CAACAAAGTAAAATTATTCTGTTAGATGAACCCTTCACTGGCGTTGATGTAAAAACGGAAAATGCGATTATGGCATTGTT
GGATCAACTACGAAGTGAAGGGCATTTAATTTTAATTTCTACCCATAACTTAGGTACTGTACCTGATTTCTGTGATCAAG
TGGTGATGATTAACCGCACTGTATTAGCGGCAGGTAAAACGGAAACAACCTTTACACAACGAAATCTCGAATTAGTCTTC
GGTGGGGTGTTACGTCATATTAAATTACTTGGAAAAGATATCCACGATGATGAGGATAGCCGCTCCGTTACCGTATTAAG
TGATGATGAACTTCCTGCTGTCTTCTATGGTGAAACGAAAAATGATCCGCCCGCACCTATTACTAAACATCCTCAACGAA
AAGGCGAACAATAA

Protein sequence : 
MPSPTIASISVNDVTVRYNNGHLAIYDTTFNLEGGTTCALVGVNGSGKSTIFKSLMGLVKPQKGEIQLCGLPISAALKQN
LVAYVPQSEDVDWQFPVSVYDVVMMGRYGYMNFLRMPKAIDKQKVKEAMQRVNIEHLADRQIGELSGGQKKRVFLARALA
QQSKIILLDEPFTGVDVKTENAIMALLDQLRSEGHLILISTHNLGTVPDFCDQVVMINRTVLAAGKTETTFTQRNLELVF
GGVLRHIKLLGKDIHDDEDSRSVTVLSDDELPAVFYGETKNDPPAPITKHPQRKGEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-72 63
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-71 63
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-72 63
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-71 62
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-71 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005362844.1 manganese/iron transport system ATP-binding protein BAC0440 Protein 8e-99 71
sitB YP_005362844.1 manganese/iron transport system ATP-binding protein BAC0350 Protein 1e-71 62
sitB YP_005362844.1 manganese/iron transport system ATP-binding protein BAC0400 Protein 1e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005362844.1 manganese/iron transport system ATP-binding protein VFG0526 Protein 1e-71 62