Gene Information

Name : vatB (PMCN06_2266)
Accession : YP_005364658.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Resistance
Product : transferase hexapeptide repeat containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2369477 - 2370100 bp
Length : 624 bp
Strand : -
Note : -

DNA sequence :
ATGCGATTTCCTGATAAAGATCAGATTTTCCCTATCAAACATTATCACCGACTGTGCTTTTTAAAAAACTTAGTTCGTCA
TCCTAATATTATTGTGGGGGATTTTACCTACTACGATGATGCAGAGAATGTGGAAAATTTTGAGAAAAATGTGAAATACC
ATTTTGACTTTTTAGGCGATAAATTGATCATCGGTAAATTTTGCATGATTGGATCGGATGTGAAATTTATTATGAATGGC
GCCAATCATCAAATGAATGCCATCTCCACTTACCCATTTGGGATTTTTGGTTATGAATGGGCAAAAGCGTTACCGGAGAA
AGCCGAATTATCGAGCAAAGGGGATACGGTTATTGGGAATGACGTTTGGATTGGCTATAACGCCACGATTATGCCAGGCG
TAAAAATTGGCGATGGCGCAATTATTGGCACAAATTCGGTTGTCACCAAGAATGTGCCACCTTATGCGATTGTCGCAGGA
AATCCCGCTCGCGTGATTAGAAAACGTTTCTCACCTGAAAAAATTGAACAATTATTAGCATTAAAATGGTGGGATTGGGA
GATTGAGAAAATCACGCGTAATCTTGACTTTTTAACTGGCAAAATCAGTGACCCGATTGAGTAA

Protein sequence :
MRFPDKDQIFPIKHYHRLCFLKNLVRHPNIIVGDFTYYDDAENVENFEKNVKYHFDFLGDKLIIGKFCMIGSDVKFIMNG
ANHQMNAISTYPFGIFGYEWAKALPEKAELSSKGDTVIGNDVWIGYNATIMPGVKIGDGAIIGTNSVVTKNVPPYAIVAG
NPARVIRKRFSPEKIEQLLALKWWDWEIEKITRNLDFLTGKISDPIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-29 45
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-29 45
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 9e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vatB YP_005364658.1 transferase hexapeptide repeat containing protein AM180355.1.gene2499. Protein 3e-45 48
vatB YP_005364658.1 transferase hexapeptide repeat containing protein AY740681.1.gene5.p01 Protein 5e-30 45
vatB YP_005364658.1 transferase hexapeptide repeat containing protein AF322577.2.gene4.p01 Protein 5e-30 45
vatB YP_005364658.1 transferase hexapeptide repeat containing protein AY123251.gene2.p01 Protein 3e-30 44
vatB YP_005364658.1 transferase hexapeptide repeat containing protein NC_002516.2.878374.p Protein 6e-29 44
vatB YP_005364658.1 transferase hexapeptide repeat containing protein CP001581.1.gene990.p Protein 1e-32 43
vatB YP_005364658.1 transferase hexapeptide repeat containing protein JF268688.1.gene6.p01 Protein 1e-29 43