Gene Information

Name : wcaJ (PMCN06_0219)
Accession : YP_005362648.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 208802 - 209404 bp
Length : 603 bp
Strand : -
Note : -

DNA sequence : 
ATGCTAAAACGTTTTCTCGATATTGTGATTTCAGCCACTGCGCTAATTTTACTTTCTCCCCTATTTTTAATTATTGCTTA
TCAAGTAAAAAAAAATCTAGGGACGCCTATTTTATTTCATCAGATGCGCCCTGGGCGATATGGTAAAGCGTTTAACATGA
TCAAATTCCGCACAATGAAGGACAGCAGAAATGAAAAAGGCGAACTTTTACCTGATAGTGAACGATTAACACCCTTTGGT
CATTTCCTACGTTCAAGTAGCCTAGATGAGTTACCGGAATTATGGAATGTATTAAAAGGCGATATGAGTTTAGTTGGACC
TCGTCCTCTCTTAATGGAATATCTCCCCTTATACAATGCTGAACAAGCTAAACGGCATAACGTGCGCCCCGGCATTACCG
GTTATGCCCAAGTTAACGGGCGTAATGCAATCAGTTGGGAACAAAAATTCAAATTAGATGTTTGGTACGTAGAAAATCAA
TCGTTGTGGCTAGATATCAAGATTCTCTTGAAAACCCTCAACGTCGTCATTTTTCGCAAAAATGTTAACGATCAATCGGG
GCATTCGATGCCGAGATTTTTAGGTGATACGGAGAAAAAATAA

Protein sequence : 
MLKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMKDSRNEKGELLPDSERLTPFG
HFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNAEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQ
SLWLDIKILLKTLNVVIFRKNVNDQSGHSMPRFLGDTEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 4e-25 42
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 9e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wcaJ YP_005362648.1 sugar transferase VFG1309 Protein 9e-28 41
wcaJ YP_005362648.1 sugar transferase VFG1369 Protein 6e-22 41