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Name : clpB (PMCN06_2153) Accession : YP_005364545.1 Strain : Pasteurella multocida HN06 Genome accession: NC_017027 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 2259309 - 2261876 bp Length : 2568 bp Strand : - Note : - DNA sequence : ATGAATATCGAAAAATTTACGACAAAATTTCAACAAGCGCTGCAAGAGGCGCAATCTTTAGCCATTGGCAAAGATAACCA ATTTATTGAACCCATCCATTTACTCACCGCCTTGTTAAATCAACAAGGTGGTTCCACTGCGCCAATTTTAACGGCAAGTG GGGCAAACTTACCGCTCTTGCGTAATGAATTAAATGCCGAGCTCAGTAAATTACCACAAGTGTCAGGCAGCGGTGGTGAT GTACAAGTTTCACGGAGTTTAGTGAATCTATTAAACTTGTGCGACAAGTTAGCACAGCAACGCCAAGATAAATTTATTTC CTCTGAATTGTTTTTACTGGCAGCGTTAGAAGACAAAACACTTGGTGATGTGTTGAAAAAGTGCGGTGTGAAAAAAGAAA ATTTACAACAGGCAATAGAGAAAGTCCGTGGCGGACAAAATGTGAATGATCCAAATGCGGAAGAAAGTCGCCAAGCGTTA GAAAAATATACGATTGATTTAACGGCGCGTGCAGAAAGCGGCAAACTTGACCCTGTGATTGGGCGTGATGAAGAAATTCG TCGTGCCATTCAAGTATTACAACGCCGTACCAAAAACAATCCAGTGTTAATCGGTGAACCGGGCGTGGGGAAAACTGCGA TTGTCGAAGGGCTGGCGCAACGCATTGTCAATGGTGAAGTACCCGAAGGCTTGAAAAATAAGCGCGTTCTGTCTTTAGAT ATGGGGGCATTGATTGCCGGTGCAAAATACCGTGGTGAATTTGAAGAACGTTTAAAAGCGGTGTTAAATGAACTGTCAAA AGAAGAAGGACGCGTGATTCTCTTTATTGATGAAATTCACACCATGGTAGGGGCAGGGAAAACCGATGGCGCGATGGATG CCGGTAACTTGCTCAAACCAAGCTTAGCCCGTGGGGAATTACACTGCGTGGGGGCGACGACACTAGATGAATATCGTCAA TACATAGAGAAAGATGCCGCCCTTGAGCGTCGTTTCCAAAAAGTGTTTGTTGGTGAGCCAACGGTGGAAGATACCATTGC GATCTTACGTGGGTTAAAAGAACGTTACGAAATCCACCACCATGTTCAAATTACTGACCCTGCGATTGTGGCGGCAGCGA CCCTTTCTCATCGTTATGTATCTGATCGTCAGCTACCTGATAAAGCGATTGATTTAATTGATGAAGCAGCATCGAGCATT CGTATGGAAATTGACTCTAAACCTCAGCCGTTAGATCGTTTAGAGCGCCGTATTATTCAATTAAAATTAGAGCAACAAGC GCTACAAAAAGAAGATGATGATGCGAGTCGTAAACGTTTAGCAATGCTTGAAAAAGAATTAGGTGAAAAAGAACGTGAAT ATGCAGAATTAGAAGATGTTTGGAAAGCTGAAAAAGCCGCCCTTTCAGGTACACAGCATATTAAAGCGGAGCTAGACAGT GCCAAAACACAAATGGAACAAGCTCGCCGTGCCAGTGACTTCGCAAAAATGTCGGAACTACAATACGGAGTGATCCCCGC GCTAGAAAAACAATTGGCGCAAGCAGAATCCGCTGAAGGCAAAGAAATGACTTTACTGCGCTATCGTGTGACCGATGAGG AAATTGCCGAAGTGCTTTCGCGCGCAACTGGTATTCCTGTGGCGAAGATGATGGAAGGGGAAAAAGAAAAACTCTTACGT ATGGAAGAAGAATTGCACAAACGAGTGATTGGTCAACATGAAGCCATTGAAGCAGTATCGAATGCAATTCGCCGTAGCCG TGCTGGGTTATCCGATCCAAATCGTCCAATTGGATCGTTCTTGTTCTTAGGTCCAACCGGAGTCGGGAAAACAGAACTTT GTAAAACCCTTGCCAATTTCCTGTTTGATGACGAAAACGCGATGGTGCGTATTGATATGTCAGAATTTATGGAAAAACAC AGTGTTTCACGCTTAGTGGGCGCCCCTCCAGGTTATGTGGGTTACGAAGAAGGAGGCTATTTAACCGAAGCCGTTCGTCG TCGCCCTTATTCCGTGATCTTGCTTGATGAAGTGGAAAAAGCACACCATGATGTGTTTAACATTTTATTACAAGTGTTAG ATGATGGACGCTTAACCGATGGACAAGGGCGCACCGTGGATTTCCGCAATACTGTGGTAATCATGACATCTAACTTAGGC TCACACTTGATCCAAGAAAACAGTACATTGGATTACCCAAGTATGAAAGAGTTAGTGATGTCTGTGGTGGGACAACATTT CCGCCCAGAATTTATCAACCGTATTGATGAAACCGTCGTCTTCCACCCATTAGGTAAAGAAAACATTCGTGAGATTGCGA CAATCCAACTTGCTCGCTTAATCAAACGTATGGAAAGCCATGGTTATCAATTACACTTCACCGATGCTTGCTTAGACTTT ATTGGCGAGGTAGGTTACGATCCGGTGTATGGCGCACGTCCGTTAAAACGTGCGATTCAACAAGAAATTGAGAACCCGTT GGCACAACAAATTCTGTCAGGCAAATTATTACCGAATCAATTAGTCACCATTGACTATGTTGACGGAAAAGTGATTGCCA ATCAGTAA Protein sequence : MNIEKFTTKFQQALQEAQSLAIGKDNQFIEPIHLLTALLNQQGGSTAPILTASGANLPLLRNELNAELSKLPQVSGSGGD VQVSRSLVNLLNLCDKLAQQRQDKFISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQAL EKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLD MGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQ YIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSI RMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDS AKTQMEQARRASDFAKMSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLR MEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKH SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG SHLIQENSTLDYPSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDF IGEVGYDPVYGARPLKRAIQQEIENPLAQQILSGKLLPNQLVTIDYVDGKVIANQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-154 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005364545.1 | chaperone protein ClpB | VFG2076 | Protein | 2e-103 | 41 |
