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Name : gabD (PMCN06_1803) Accession : YP_005364202.1 Strain : Pasteurella multocida HN06 Genome accession: NC_017027 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 1914802 - 1916247 bp Length : 1446 bp Strand : + Note : - DNA sequence : ATGCAACAATTTTCCCTATTAAAAACCAAAGCCTATATTAATGGCGAGTATGTACAGGCAAAGGATCACAAAACCTTTGC GGTTACTAATCCAGCGAACCAACAAATCATTTGTGAGTTGCCAGATTTAAGCGCAGAAGAAACCGAATATGCGATTGTTT GCGCGGCACAAGCCCAGAAAAAATGGCAAAAAGTTACGCCGAAAGAACGCGCGAATCTCTTACGCCGTTGGTATAACTTA GTCATTGAAAACCAAGAAGAATTAGCCCAATTACTGAGTTTAGAACAAGGTAAACCGATCAGCGAAAGTCGTGGTGAGAT TTTATATGGCGCCAGTTTTATTGAATGGTTCGCTGAAGAAGCCAAACGTATTTATGGCGACGTGTTACCACAGGATAAAG AAAATCATCGCTTATTAGTGATTAAACAAGGCATTGGGGTGGTGGGAGCAATTACTCCGTGGAACTTCCCAAATGCGATG ATTACTCGTAAAGCCGCGCCAGCCTTTGCGGCAGGTTGTGCAATGGTATTAAAACCCGCACAGGAAACCCCACTTTCTGC ATTAGCGTTGGCAGAACTGGCACACCAAGCGGGCTTACCTGCGGGGCTATTTAATGTGATTACTTCAACTCGCTCCGTTG AAATTGGCAAAGTGCTAACCGAACATCCAACGGTACGTAAAGTGACCTTTACCGGTTCGACCCGTGTGGGCAAAATCCTG ATGGCGCAATCGGCGAGTACAGTGAAAAAATTGTCATTAGAACTAGGCGGCAACGCCCCGTCGATTGTGTTTGATGATGC GGATTTAGAGAATGCTATCGAGGGCATTATCGCCTCGAAATTCCGCAACAGTGGACAAACCTGCGTCTGTACTAACCGTA TTTATGTGCAAGCCGGCATTTATGACCGTTTTGTGGAACAATTTAGCGCCAAAGTGGCGGCCTTTAAAGTTGGCAGTGCC AATGAAGCTGGTGTCAACATTGGACCATTAATCAGTCAAAGTGCGGTCAATAAAATCCAAGAACACATCGACGATGCCAC CGCAAAAGGGGCAAATTTGGTGATCGGCGGTAAGCTTCATACGCGAGGCGGTACTTTCTTTGAACCGACCGTATTGCGAG ATGTGACCCAAGCGATGTTAGTGGCAAAAGACGAAACCTTCGCCCCACTGGCACCAGTGTTTAAATTTGATACTGAAGCG CAAGTGATTGAGATGGCAAATGATACTGAATTTGGCTTAGCTTCGTATCTTTACACCCAAGATATTTCTCGCATCTGGCG AGTTTCCGAAGCATTAGAATACGGTATTGTCGGTATCAACGAAGGTCTGATCAGCAATGAAATGGCACCTTTTGGTGGCG TCAAAGAATCTGGCTTAGGTCGCGAAGGTTCCCGCTACGGCATCGACGAGTTTTTAGAAATCAAATACCTTTGTTTGAAA GTGTAA Protein sequence : MQQFSLLKTKAYINGEYVQAKDHKTFAVTNPANQQIICELPDLSAEETEYAIVCAAQAQKKWQKVTPKERANLLRRWYNL VIENQEELAQLLSLEQGKPISESRGEILYGASFIEWFAEEAKRIYGDVLPQDKENHRLLVIKQGIGVVGAITPWNFPNAM ITRKAAPAFAAGCAMVLKPAQETPLSALALAELAHQAGLPAGLFNVITSTRSVEIGKVLTEHPTVRKVTFTGSTRVGKIL MAQSASTVKKLSLELGGNAPSIVFDDADLENAIEGIIASKFRNSGQTCVCTNRIYVQAGIYDRFVEQFSAKVAAFKVGSA NEAGVNIGPLISQSAVNKIQEHIDDATAKGANLVIGGKLHTRGGTFFEPTVLRDVTQAMLVAKDETFAPLAPVFKFDTEA QVIEMANDTEFGLASYLYTQDISRIWRVSEALEYGIVGINEGLISNEMAPFGGVKESGLGREGSRYGIDEFLEIKYLCLK V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-144 | 63 |
