Gene Information

Name : hpcD (PMCN06_1799)
Accession : YP_005364198.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1911515 - 1911898 bp
Length : 384 bp
Strand : +
Note : -

DNA sequence :
ATGCCACACTTTATTGTTGAAGCCACCGAAAATTTGCGTGATGACGTGGATTGGCAACCATTATTTAAACAGGTGCACGA
TTATCTTGCCAGTACCAGTATTTTCCCTTTAGGCGGCATTCGCAGTCGCGTGCATTGGGTGGATGTGTATCGTATGGCGG
ATGGGATAGAAGATGATGCTTTTGTGCATATCACGTTAAAGATTGGTGCGGGACGTGATGAAGCCAGTTTAAAACCTGTC
GGCGAACAGGTGTTTACACTGTTAACGAATTACTTTCAACCGCTATTTGAGAAACGCTATTTTGCGCTGTCATTTGAAAT
GGCGGAATTGCATCCGACCTTAAATTTCAAGAAAAACAATGTGCATTTGAGATTTAAGAAATAA

Protein sequence :
MPHFIVEATENLRDDVDWQPLFKQVHDYLASTSIFPLGGIRSRVHWVDVYRMADGIEDDAFVHITLKIGAGRDEASLKPV
GEQVFTLLTNYFQPLFEKRYFALSFEMAELHPTLNFKKNNVHLRFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 5e-29 56