Gene Information

Name : xerD (PMCN06_1211)
Accession : YP_005363624.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1303230 - 1304123 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGATTCCGCGTTAATTGAGCTTTTTCTAAATGAAATTTGGATCGAAAAGCAACTCTCGCAAAATACGATTGCCTC
TTATCGCTTAGATTTGACTGCACTCATTCAATGGCTAGAAAAACAACAATTAACGCTTATCAATCTGGATGCCATCGACT
TACAAACATTTCTAGGTGAACGCTTAAACCAAGGCTACAAAGCCACTAGCACAGCTCGCCTACTCAGTGCAATGCGAAAA
TTATTTCAATACTTATACCGCGAAAAATACCGCACAGATGATCCCAGTGCGGTATTAAGTTCTCCCAAATTACCTAGCCG
CTTGCCTAAATACCTAACGGAACAACAAGTTACTGATTTACTGAACTCCCCTGATGTCGATATCCCCTTAGAATTACGCG
ATAAAGCCATGATGGAATTGCTTTATGCAACAGGATTACGGGTCACTGAATTAGTGTCGTTGACTATTGAAAACATAAAC
ATTAATCAGGGGATTGTACGGGTTGTTGGTAAAGGAAACAAAGAACGGATTGTTCCCATTGGGGAAGAAGCAACTTATTG
GATTCGTCAATTTATGCTATATGGGCGTCCTTTTTTATTGCATGGACAAAGCTCAGATGTCGTCTTCCCAAGTAAAAGAG
CGCTACAAATGACACGCCAAACCTTTTGGCACCGTATTAAACATTATGCGCTTTTGAGTGAGATTGATATCAATAGCTTA
TCGCCCCATGTACTGCGTCACGCTTTTGCTACACATTTAGTAAATCATGGTGCGGATTTGCGTGTAGTACAAATGTTACT
CGGACACAGCGATTTATCCACAACACAAATTTATACTCACGTTGCTAAAGAGCGTTTAAAACATTTGCATGAACGCTACC
ATCCAAGGGGCTAA

Protein sequence :
MKDSALIELFLNEIWIEKQLSQNTIASYRLDLTALIQWLEKQQLTLINLDAIDLQTFLGERLNQGYKATSTARLLSAMRK
LFQYLYREKYRTDDPSAVLSSPKLPSRLPKYLTEQQVTDLLNSPDVDIPLELRDKAMMELLYATGLRVTELVSLTIENIN
INQGIVRVVGKGNKERIVPIGEEATYWIRQFMLYGRPFLLHGQSSDVVFPSKRALQMTRQTFWHRIKHYALLSEIDINSL
SPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTHVAKERLKHLHERYHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-55 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-55 55