Gene Information

Name : fepD (PMCN06_1174)
Accession : YP_005363587.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Virulence
Product : iron-dicitrate transporter subunit FecD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1267807 - 1268799 bp
Length : 993 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGCCAATAGCAAACCACTTACACGCTTTAAAATACCTTTTTATCCAACCGCACTTTTGCTGTTGTTGATACTCTT
TTGTTTAAGTTTACAGCTAGGCACCTATCATCTCTCTATCAGTGAAATTTGGCAGATTTTACATCACCCTGAAGACGCCA
ATCACTTTACGTTAATGGAATATCGTTTGCCACGTGCCTTGCTCGCGATCTTAATGGGCAGTGCCTTAGCAGTTTCTGGC
GTGTTAGTGCAAAGTGTGGTGAGAAATCCCCTCGCCTCGCCAGATATTCTCGGTATCAACAACGCGGCAGGGCTAGTCGC
GGTGATTAGCTTGATTTATTTCCCGGGACTTGCTTTTTACTGGTTACCTATTTTTGCCTTTATTGGTGGTATTTTGTCTT
TTCTGCTACTTTGGCTTATTTGTGGTTTACATTTTCGTCCCCTGAAAATGGCGATTATTGGGGTCGCGCTGTCTGCCTTA
TGGGCTGCAGCAAGCCACTATCTAATGCTATCCAATCCAGTTGATATTAACTCCGCGATGTTATGGTTAACCGGCAGCCT
ATGGGGACGGAGTTGGTCTTACTTATTGGTGGTGTTACCTTGGTTGCTTGTGCTACTGCCTTTGGCTTTTCTGTTCTGTC
GTGATCTGGATACCTTAGCATTAGGCGAAAACAAAGCCGCTACTTTAGGGGTATCCCTTCACAAAATGCAGATCATCGTG
TTGCTACTTTCTGTGGCGCTTGCCACCACCGCGGTTGCGATTTATGGTCCAATCGCATTTCTCGGCTTAGTCGCACCGCA
CTTTGCTCGCCATTTAGTCGGCGGTCGTCATCGAACCTTATTGCCAGCGGCATTACTGTTAGGAGCAATTTTACTGCTGA
TTTCAGATATTTTAGCCCGCATTATTGCTCCCCCTGTGGAGATTCCCGCTGGGGTCCTCACCGCAATTTTAGGGGCACCA
TATTTTTTCTATTTATTAATGAGAACGAAATAA

Protein sequence : 
MAANSKPLTRFKIPFYPTALLLLLILFCLSLQLGTYHLSISEIWQILHHPEDANHFTLMEYRLPRALLAILMGSALAVSG
VLVQSVVRNPLASPDILGINNAAGLVAVISLIYFPGLAFYWLPIFAFIGGILSFLLLWLICGLHFRPLKMAIIGVALSAL
WAAASHYLMLSNPVDINSAMLWLTGSLWGRSWSYLLVVLPWLLVLLPLAFLFCRDLDTLALGENKAATLGVSLHKMQIIV
LLLSVALATTAVAIYGPIAFLGLVAPHFARHLVGGRHRTLLPAALLLGAILLLISDILARIIAPPVEIPAGVLTAILGAP
YFFYLLMRTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 5e-51 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_005363587.1 iron-dicitrate transporter subunit FecD BAC0163 Protein 2e-51 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_005363587.1 iron-dicitrate transporter subunit FecD VFG1043 Protein 3e-51 53