|
Name : lysU (PMCN06_1111) Accession : YP_005363524.1 Strain : Pasteurella multocida HN06 Genome accession: NC_017027 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1208992 - 1210497 bp Length : 1506 bp Strand : + Note : - DNA sequence : ATGTCAGAACAAACTCAAGAACTTGATCTTAATGGCGAGATGTTAGTCCGCCGTGAAAAATTAGCCGCGTTGCGCGCTAA AGGTAACCCATTTCCAAATACATTTCGTCGTGATGCGCTTGCACAAGATTTACACGCAAACTACGATGCACTTGAAGGCG AAGCATTAAAAGCACAAGAAGTCGAAGTAAAAGTCGCTGGACGTATTATGACGCGTCGTGCAATGGGTAAGGCGACTTTT ATCACCTTGCAAGATATGTCTGGTCGTATTCAACTCTATATCGCACGTGATAATTTGCCAGAAGGTGTTTATGCTGACGA TGTGGGACAGTGGGATTTAGGCGATATCATTGGCGTAAAAGGCACCTTATTTAAAACCAAAACCAATGAATTAACCGTAC GTTGTACTGAAGTGCAGTTATTAACCAAAGCATTACGCCCATTACCAGATAAATTCCATGGTCTAAGCGATCAAGAAACA CGCTATCGTCAACGTTATTTAGATTTAATTGCAAACGAAGACTCACGTCGTACTTTCATTATTCGTTCTAAAGTGATTGC GGGTATTCGTGAATATTTTCTGTCAAAAGGCTTTATGGAAGTAGAAACCCCGATGTTACAAATTATTCCGGGTGGGGCTT CTGCACGTCCATTTGTAACACATCATAATGCATTAGATGTGGATATGTATTTACGTATTGCGCCTGAGCTTTATTTAAAA CGCTTAGTGGTTGGTGGCTTTGAACGTGTCTTTGAATTAAACCGCAACTTCCGTAACGAAGGGGTGTCTGTTCGCCATAA CCCAGAATTTACCATGCTCGAATACTACCAAGCCTATGCGGATTACCATGATTTAATGGATAATACTGAAGAATTGTTAC GTAAACTGGCAATGGACATTTTAGGCACGACGATTGTCCCTTATGGTGAGCTTGAATTTGATTTTGGCAAACCATTTGAA CGTATCACGATGCATGATGCCATTTTGAAATACGGCGCAGAAAAAGGTATCGTCAAAGAGGATTTATATGACTTTGATCG TGCTGTTGCCGTTGCGAAAAAATTAGGTATTGAAGTACAAAAATCGTGGGGTTTAGGCAGTCTAGTCAATGTAATTTTTG AAGAGGTGGCGGAGCATCACTTAATTCAGCCAACGTTCTTAATGGCACACCCTGCCGAAATTTCGCCATTAGCGCGTCGT AATGATGAAAATCCAGAGGTCACTGACCGTTTTGAATTATTCATCGGTGGACGTGAAATTGGTAACGGTTTCTCTGAGTT AAACGATGCCGAAGATCAAAACGAACGCTTTGACGCACAAGTTGCGGCGAAAGAGGCGGGGGATGATGAAGCGATGTTTA AAGACGAAGATTTCGTGACCGCTCTTGAACATGGCTTACCACCAACAGCAGGCGAAGGGTTAGGTATCGACCGCTTAGCG ATGCTATTCGCGAATGCGGCCTCCATTCGAGATGTGATACTCTTCCCAGCAATGAAGCAGAAATAA Protein sequence : MSEQTQELDLNGEMLVRREKLAALRAKGNPFPNTFRRDALAQDLHANYDALEGEALKAQEVEVKVAGRIMTRRAMGKATF ITLQDMSGRIQLYIARDNLPEGVYADDVGQWDLGDIIGVKGTLFKTKTNELTVRCTEVQLLTKALRPLPDKFHGLSDQET RYRQRYLDLIANEDSRRTFIIRSKVIAGIREYFLSKGFMEVETPMLQIIPGGASARPFVTHHNALDVDMYLRIAPELYLK RLVVGGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAMDILGTTIVPYGELEFDFGKPFE RITMHDAILKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWGLGSLVNVIFEEVAEHHLIQPTFLMAHPAEISPLARR NDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLA MLFANAASIRDVILFPAMKQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-154 | 64 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-90 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_005363524.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 9e-155 | 64 |
