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Name : clpA (KQS_04215) Accession : YP_005356880.1 Strain : Flavobacterium indicum GPTSA100-9 Genome accession: NC_017025 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 947009 - 949552 bp Length : 2544 bp Strand : + Note : - DNA sequence : ATGGAAGATAATTTTTCACCTAGAGTTAAAGATGTTATTTTTTATAGTAAAGAAGAAGCATTGCGTTTAGGTCATGATTT TATAGGTACAGAGCATCTTATACTTGGTTTGCTTAGAGATGGAAATGGAAGTGCAATGGATATACTGAATTCAATGCAGA TTAACTTTGATGTATTACGTAAAAAAGTTGAGATTCTTAGTCCGGCAAATCCAACTAGCACTGTCAGTAATGATAAAAAG AATTTACACTTAACAAGACAAGCTGAAAGAGCTTTAAAATATACTTTTTTAGAAGCCAAATTATTCAATACGACTTCAAT TAGTACGGCTTTATTGTTGTTATGTATTTTAAAAAACGATAATGACCCTACTACAAAATTGTTGAATAAACTTAAAATTA ATTATGATAACGTAAAAGAACTGTATATGAATATGAGCGAAAACGAAGATATACTAAAAAATACACCTCGAGCAGAATCA TTTGACGACTCGGGAGATGAAGGATTTAAAGATAGTGGAATGAGTTCATCGAGTAATAGTGGTAATAAAACAACAAAAAA ATCAAAAACTCCAGTATTAGATAATTTTGGTAGAGATTTAACTGAATTGGCAGAAGAAGGGAAGTTGGATCCTGTTGTTG GACGTGAAAAAGAAATTGAGCGTGTTTCTCAAATTTTAAGTCGAAGAAAGAAAAACAATCCATTATTAATTGGAGAACCA GGAGTGGGTAAATCTGCAATTGCTGAAGGCTTAGCTTTAATGATTGTTAAGAAAAAAGTATCGCGTATTCTTTTCAATAA ACGTGTAGTTACGCTTGATTTAGCGTCTTTAGTTGCTGGAACTAAATACCGAGGACAATTTGAAGAACGCATGAAAGCGG TAATGAATGAATTGGAAAAAAATGACGATATCATCCTTTTTATTGATGAAATCCACACTATTGTTGGTGCTGGTGGCGCT ACAGGATCGCTAGATGCTTCTAACATGTTTAAACCAGCATTAGCAAGAGGGGAAATTCAATGTATCGGTGCTACAACATT AGACGAATACCGTCAATACATTGAAAAAGATGGGGCGTTAGAAAGACGATTCCAAAAAGTAATTGTGGAGCCAACTACGG TGGAAGAAACGATTACGATACTAAACAATATTAAAGGTAAATACGAAGATCACCACAATGTAATTTTTACACCAGAAGCC ATTGAAGCTTGTGTGAAATTAACCAGTCGTTACATGACAGATCGTTTTTTACCAGATAAGGCAATTGATGCTTTAGATGA AGCAGGCTCAAGAGTTCACATCACAAATATTGAAGTGCCAAAACAAATTTTGGAACTTGAAAAGCAATTGGAAGAAGTTA GAGAACTAAAAAACTCAGTAGTTAAAAAACAAAAGTTTGAAGAAGCCGCTAAACTTCGAGATGATGAGAAAAAAATTGAA AAAGATTTAGCTATTGCGCAAGAAAAATGGGAAGAAGATTCTAAAAACAATAGGGTTACAGTAACGGAAGATAATGTCGC GGATGTAGTTTCTATGATGACTGGAATTCCTGTGAATCGTATTGCTCAAACAGAAAGTAATAAATTAGCAAAACTTCCAG ATTTAATTAAAGGAAAAGTAATTGGACAAGATGAAGCTGTTCAAAAAATAGCAAAATCGATTCAAAGAAATAGAGCTGGA TTAAAAGATCCTAACAAACCTATTGGTTCATTTATTTTCTTAGGTTCAACAGGTGTTGGAAAAACACAATTAGCAAAAGT ATTAGCAAAGGAATTATTCGATTCTGAAGATGCTTTAGTGCGTATCGATATGAGTGAATACATGGAAAAATTTGCTATTT CAAGATTAGTTGGTGCGCCTCCAGGGTATGTAGGTTATGAAGAAGGTGGACAATTAACTGAAAAAGTAAGAAGAAAACCG TATTGTGTTGTACTTTTAGATGAAATTGAAAAAGCACACCCTGATGTGTTTAATATGTTGTTACAAGTATTGGATGATGG ACATTTAACTGATAGTTTAGGTCGTAAAATTGATTTTAGAAATACAATAATTATTATGACTTCTAATATTGGCGCGCGTC AATTAAAAGACTTTGGACAAGGTGTTGGATTTGGAACATCAGCAAAAGTAGCTCAAACAGAAGAACACAATAAATCAGTC ATCGAAAATGCTTTGAAAAAGGCTTTTGCACCAGAGTTTTTGAATAGAATTGACGATGTTATTGTATTTAATGCTTTAGA AAAACATGATATTGATAAAATCATTGATATTGAAATGGCTAAATTAGTCGCTCGTATCAAAGATTTAGGTTATGATTTAA CATTGTCTGAAAAAGCAAAAGATTTTATAGCCGAAAAAGGATTTGATAAGCAATTTGGAGCTCGACCTTTGAAAAGAGCC ATACAAAAATATGTTGAAGATGCTTTGGCGGAAGAAATTATTACTTCCAAAATAAATCAAGGCGATACCATCTTTATGGA TTTAGATGAAACCGCTCAAGAGTTAACTATTAAAATAGAGAAAACTGAAAAACCTGCTAATTAG Protein sequence : MEDNFSPRVKDVIFYSKEEALRLGHDFIGTEHLILGLLRDGNGSAMDILNSMQINFDVLRKKVEILSPANPTSTVSNDKK NLHLTRQAERALKYTFLEAKLFNTTSISTALLLLCILKNDNDPTTKLLNKLKINYDNVKELYMNMSENEDILKNTPRAES FDDSGDEGFKDSGMSSSSNSGNKTTKKSKTPVLDNFGRDLTELAEEGKLDPVVGREKEIERVSQILSRRKKNNPLLIGEP GVGKSAIAEGLALMIVKKKVSRILFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKNDDIILFIDEIHTIVGAGGA TGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALERRFQKVIVEPTTVEETITILNNIKGKYEDHHNVIFTPEA IEACVKLTSRYMTDRFLPDKAIDALDEAGSRVHITNIEVPKQILELEKQLEEVRELKNSVVKKQKFEEAAKLRDDEKKIE KDLAIAQEKWEEDSKNNRVTVTEDNVADVVSMMTGIPVNRIAQTESNKLAKLPDLIKGKVIGQDEAVQKIAKSIQRNRAG LKDPNKPIGSFIFLGSTGVGKTQLAKVLAKELFDSEDALVRIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRKP YCVVLLDEIEKAHPDVFNMLLQVLDDGHLTDSLGRKIDFRNTIIIMTSNIGARQLKDFGQGVGFGTSAKVAQTEEHNKSV IENALKKAFAPEFLNRIDDVIVFNALEKHDIDKIIDIEMAKLVARIKDLGYDLTLSEKAKDFIAEKGFDKQFGARPLKRA IQKYVEDALAEEIITSKINQGDTIFMDLDETAQELTIKIEKTEKPAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-175 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_005356880.1 | ATPase with chaperone activity ATP-binding subunit | VFG0080 | Protein | 3e-146 | 52 |
| clpA | YP_005356880.1 | ATPase with chaperone activity ATP-binding subunit | VFG0079 | Protein | 0.0 | 49 |
