|
Name : kdsD (KQS_03555) Accession : YP_005356754.1 Strain : Flavobacterium indicum GPTSA100-9 Genome accession: NC_017025 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 805756 - 806721 bp Length : 966 bp Strand : - Note : - DNA sequence : TTGAACACAGCTGAAACAATACTACTAAATGCAAAAAAATCAATACTTTCTCAAAGTGAAAGCATTGCCAAATTAATAGA CTTTTTAAACGAAGATTTTATAAAAACAGTTGAACTAATCTACAACAGTAAGGGCAGATTAGTTGTAACGGGGATTGGAA AAAGTGCCATAATTGCTCAAAAAATTGTTGCAACTTTAAATTCTACAGGTACGCCTTCGCTTTTTTTACATGCTGCTGAA GCCATTCATGGAGATTTAGGCATGGTACAACCTGGCGATGTTGTAATTTGTATTTCAAAAAGTGGAAACAGTCCAGAAAT AAAAGTATTGGCTCCTATAATCAAAAATTTTGGAAATACTTTAATAGGAATGACCGCTAATGAACAGTCTTTTTTAGCTC AAGAATCGGACTTCGTTTTATTAGCCTATGTTGATGCAGAATCTTGTCCTAATGGATTAGCACCAACAAACAGTACTACA GCTCAATTAGTTTTGGGAGATGCACTGGCTGTTTGCTTAATGCAGATGAGAAATTTTAGCAGTGAAGATTTTGCCAAATA CCATCCAGGAGGCGCTTTAGGTAAAAAATTATTACTGCGTGTAAAAGATATGTTAGACACTACACACACACCACAAGTGA GTCCAGAAGCGAGTATTAAAAAAGTCATCATGGAAATCTCAGAAAAAAGATTGGGTGTAACTGCAGTAATTGAGCATAAT AAAGTAATTGGTATCATAACCGATGGAGATATTAGAAGAATGCTAAACGATAGAGATTCGTTTGCTGATTTATGCGCAAA GGATATCATGACAAAAAACCCAAAGCATATTTCTTCTAACCTATTAGTTTCTGAAGCGTTGGACGTATTAGAAAACAATA AAATCACACAGTTAGTGGTATTAGACAACGAAGAATACAAAGGAATTTTACATTTACACGATATATTAAAAGAAGGAATA GTATAA Protein sequence : MNTAETILLNAKKSILSQSESIAKLIDFLNEDFIKTVELIYNSKGRLVVTGIGKSAIIAQKIVATLNSTGTPSLFLHAAE AIHGDLGMVQPGDVVICISKSGNSPEIKVLAPIIKNFGNTLIGMTANEQSFLAQESDFVLLAYVDAESCPNGLAPTNSTT AQLVLGDALAVCLMQMRNFSSEDFAKYHPGGALGKKLLLRVKDMLDTTHTPQVSPEASIKKVIMEISEKRLGVTAVIEHN KVIGIITDGDIRRMLNDRDSFADLCAKDIMTKNPKHISSNLLVSEALDVLENNKITQLVVLDNEEYKGILHLHDILKEGI V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-50 | 41 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-50 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-50 | 41 |
