Gene Information

Name : wbpO (KQS_03280)
Accession : YP_005356699.1
Strain : Flavobacterium indicum GPTSA100-9
Genome accession: NC_017025
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-galactosamine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.-
Position : 744369 - 745655 bp
Length : 1287 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATTAAAATTGCAATCATCGGATTAGGTTATGTGGGGTTACCATTAGCAAGATTATTTGCTACTAAGTATCCTGT
TATCGGATTTGATATTAACAAACAAAGAATTTCGGAATTAAATCAAGGTATTGATTTAACTTTAGAAGTAGATCAGGAAT
TGTTACAATCAGTTTTGAAAACTCATAATTCAACTCTAACAACTAATTATTTGTATTGTTCTGATAATTTAGAAGATATT
GCCGATTGTAATTATTATATTGTAACAGTTCCAACGCCAGTTGACAAACATAATAAACCCGATTTAACGCCACTTTACAA
AGCAAGTGAAACTGTTGCAAAAGTGTTGAAAAAAGGAGATACAGTTATTTACGAATCAACCGTTTATCCTGGTGTTACAG
AAGAGGAATGTGTGCCTGTTTTAGAAAAATTATCAGGATTAAAGTTTAATGTTGACTTTTTCGCTGGGTATTCTCCTGAA
AGAATTAATCCAGGTGATAAAGAACATACTGTAGAAAAAATATTGAAAGTTACCGCAGGTTCAACTCCAGAAGTTGGATT
AAAAGTTGATGCTTTATACAAAAGTGTAATTACTGCTGGTACGCATTTAGCACCATCTATTAAAGTAGCAGAAGCTGCAA
AAGTTATCGAAAATTCACAACGCGATATTAATATTGCATTCGTTAATGAATTAGCAAAAATTTTTAATATTTTAGAAATT
GATACACAAGCAGTGTTAGAAGCCGCAGGAACAAAATGGAATTTTCTTCCTTTTAAACCTGGTTTGGTGGGCGGGCATTG
TATAGGCGTTGATCCTTATTATTTAGCTCAAAAAGCAATGGAAGCAGGATATCATCCTGAAATAATTTTGGCAGGACGTC
GTATGAATGACAGTATGGGCGAATACGTAGCTTCGGAAGTGGTAAAGCTAATGATTAAAAAAGAAATTGTTTTACACAAA
GCTGAAGTGTTGCTTTTAGGAATTACTTTTAAAGAAAATTGCCCAGATGTTCGAAATACAAAAATTGTTGATATCGTTCA
TGCTTTAAAAGAATACGGTATCAATATTACTATCTATGACCCTTGGGCAAAACCAGAAGAAGTAAAGCATGAGTATGGTA
TTGATTGTTCTTCTGAACTTGATTCAAAATCTAAATTTGATGCATTAATTTTAGGAGTGGCTCATAATGAATTTTTAGAG
ATTGATACCACCAGTATCTTAAAAGAAACGAATGTGATTTATGATGTGAAAGGTTTCTTGAAAACAGAAGTAGACGGAAG
ATTGTAA

Protein sequence :
MKIKIAIIGLGYVGLPLARLFATKYPVIGFDINKQRISELNQGIDLTLEVDQELLQSVLKTHNSTLTTNYLYCSDNLEDI
ADCNYYIVTVPTPVDKHNKPDLTPLYKASETVAKVLKKGDTVIYESTVYPGVTEEECVPVLEKLSGLKFNVDFFAGYSPE
RINPGDKEHTVEKILKVTAGSTPEVGLKVDALYKSVITAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNILEI
DTQAVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAMEAGYHPEIILAGRRMNDSMGEYVASEVVKLMIKKEIVLHK
AEVLLLGITFKENCPDVRNTKIVDIVHALKEYGINITIYDPWAKPEEVKHEYGIDCSSELDSKSKFDALILGVAHNEFLE
IDTTSILKETNVIYDVKGFLKTEVDGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-116 57
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-116 57
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-103 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpO YP_005356699.1 UDP-N-acetyl-D-galactosamine dehydrogenase VFG0431 Protein 2e-116 57