Gene Information

Name : KQS_03270 (KQS_03270)
Accession : YP_005356697.1
Strain : Flavobacterium indicum GPTSA100-9
Genome accession: NC_017025
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase family protein probably involved in polysaccharide biosynthesis
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.-
Position : 741991 - 742977 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence : 
TTGGTACAAAATATTAAAAATAAAAAAATTCTAATCACTGGTGGCGCTGGTTTCATCGGTTCTAATTTGTGTGACTATTT
TTTAAATAATCAAAATCAAATTATTTGTTTAGATAATTTTTCAACGGGATTTAAAAATAATATTGAACCTTTTTTAAAGA
ATTCAAATTTTAAATTGATTGAAGGAGATATACGTAATTTTGAAACTTGTCAAAAAGCAGTTGAAAATGTAGATTATGTA
TTGCATCAAGCAGCTTTAGGAAGTGTGCCTCGGTCTATTAATGACCCTATTACTTCTAACGATGTAAATATTTCTGGTTT
TCTAAACATGCTTGTTGCTTCAAGAGATGCTAAAGTAAAAAGATTTGTGTATGCAGCAAGTTCTTCTACTTATGGGGATT
CAGAAAAATTACCCAAAATAGAAAATGTTATAGGTAAACCATTATCTCCTTATGCTATTACAAAATACGTTAACGAATTA
TATGCTGATGTATTTAGTAAAACGTATGGAATGGAAACTATTGGATTGCGCTATTTTAATGTATTTGGTAGAAACCAAAA
TCCAAATGGTGCTTACGCAGCGGTAATACCAAAGTTTATTTCATTATTCATTAATCATGAAAGTCCTATTATTAATGGAG
ATGGAAATTTTTCAAGAGATTTTACATACATTGATAATGTAATTCAAATGAATGAATTAGCTTTGCAAACTCAAAATCCA
AACGCAATTAATCAAGTTTATAATACTGCTTTTGGAGAGCGAACAACTCTAAATGAATTAATTCAATATATAAAAGAAAA
TTTAATACAATTTGATCCTGAAATTGAACAAATTTCGGTTGCTTATGGTCCCAACAGAAGTGGGGATATTCCTCATTCAT
TAGCAGATATTTCCAAAGGGAAAGAATTATTAGGATACCAACCTAAGTATTCTGTTAAAGAAGGATTAAAAGAAGCAATT
AAATGGTATTGGGAAAATTTAAAATAA

Protein sequence : 
MVQNIKNKKILITGGAGFIGSNLCDYFLNNQNQIICLDNFSTGFKNNIEPFLKNSNFKLIEGDIRNFETCQKAVENVDYV
LHQAALGSVPRSINDPITSNDVNISGFLNMLVASRDAKVKRFVYAASSSTYGDSEKLPKIENVIGKPLSPYAITKYVNEL
YADVFSKTYGMETIGLRYFNVFGRNQNPNGAYAAVIPKFISLFINHESPIINGDGNFSRDFTYIDNVIQMNELALQTQNP
NAINQVYNTAFGERTTLNELIQYIKENLIQFDPEIEQISVAYGPNRSGDIPHSLADISKGKELLGYQPKYSVKEGLKEAI
KWYWENLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-80 57
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-80 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KQS_03270 YP_005356697.1 NAD-dependent epimerase/dehydratase family protein probably involved in polysaccharide biosynthesis VFG0430 Protein 4e-81 57