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Name : kdsB (KQS_06710) Accession : YP_005357358.1 Strain : Flavobacterium indicum GPTSA100-9 Genome accession: NC_017025 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 1484708 - 1485436 bp Length : 729 bp Strand : + Note : - DNA sequence : ATGAAAATCATCGCTGTTATTCCCGCTCGTTATGCTTCAACTCGTTTCCCTGCCAAATTAATGCAAGATTTAGGAGGTAA AACGGTCATTTTAAGAACGTATGAAGCGGCAATAGCTACACAATTATTTGATGATGTATTTGTTGTAACCGATTCGGATT TAATTTTTGAAAATATTGTCTCAAATGGGGGAAAAGCCCTAATGAGTAAAAAAGAACATGAGAGTGGAAGTGACCGCATT GCTGAGGCTGTTGAATTTATGGATGTTGATATTGTTATTAATGTACAAGGTGATGAACCATTTATTAACGCAACCCCTTT AAAGCAAATCATTGAAGCTTTTAAACAAGATTCGGATAAGAAAATAGATTTAGCTTCATTAATGTTTGAAATTAAAGAAG AAGAGGAAATTACGAATCCTAATAATGTTAAAGTTATTGTAGATCAACAAGGATTTGCTTTATATTTTTCACGCTCAGTT ATTCCTTATCCAAGAGAAAAAAATGTAGGGGTTCGTTACATGAAACATGTGGGTATATATGCCTTTAGAAAAGAAGCTTT AATGGATTTTTATAGATTACCAATGTTGTCTTTGGAAGCTTCTGAAAAATTAGAACAACTTCGCTATTTAGAATACGGGA AACGCATTAAAATGATTGAAACTATCCACGGAAGTATAGGAATTGATACTCTAGAAGATTTGGAAAAAGCCAGACAACTA TTAAAATAG Protein sequence : MKIIAVIPARYASTRFPAKLMQDLGGKTVILRTYEAAIATQLFDDVFVVTDSDLIFENIVSNGGKALMSKKEHESGSDRI AEAVEFMDVDIVINVQGDEPFINATPLKQIIEAFKQDSDKKIDLASLMFEIKEEEEITNPNNVKVIVDQQGFALYFSRSV IPYPREKNVGVRYMKHVGIYAFRKEALMDFYRLPMLSLEASEKLEQLRYLEYGKRIKMIETIHGSIGIDTLEDLEKARQL LK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 5e-42 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-42 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 6e-42 | 41 |
