Gene Information

Name : vanRB (EFAU004_02780)
Accession : YP_005355978.1
Strain : Enterococcus faecium Aus0004
Genome accession: NC_017022
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator VanRB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2844534 - 2845193 bp
Length : 660 bp
Strand : -
Note : van locus

DNA sequence : 
ATGTCGATACGAATTCTACTTGTCGAGGATGATGATCATATCTGTAATACAGTAAGGGCGTTTCTGGCTGAGGCAGGATA
TCAGGTGGATGCCTGCACAGATGGAAATGAGGCATACACCAAGTTTTACGAAAACACTTATCAACTGGTTATTCTTGATA
TTATGCTGCCCGGTATGAACGGGCATGAACTTTTGCGTGAATTTCGTGCGAAAAATGATACTCCCATTCTGATGATGACA
GCCCTGTCGGATGACGAAAACCAAATCCGGGCGTTTGATGCAGAGGCAGACGACTATGTAACAAAGCCATTCAAGATGCA
GATTTTACTAAAGCGGGTGGAAGCCCTGCTGCGGCGCAGCGGTGCGCTGGCAAAGGAAATCCGTGTCGGCAGGCTGACAC
TTCTGCCGGAGGATTTCACGGTACTTTGTGACGGTACAGAGCTGCCCCTGACACGAAAAGAATTTGAAATCCTTTTGCTG
CTGGTGCAGAACAAAGGCAGAACCTTAACGCATGAAATCATTTTGTCACGTATATGGGGATATGACTTTGAGGGTGATGG
CAGCACAGTCCACACTCATATCAAAAATTTGCGGGCCAAGCTGCCGGAAAATATCATCAAAACCATTCGCGGTGTAGGAT
ACCGATTGGAGGAATCATAA

Protein sequence : 
MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLREFRAKNDTPILMMT
ALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLL
LVQNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-100 100
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-96 97

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vanRB YP_005355978.1 DNA-binding response regulator VanRB AF310956.2.orf0.gene Protein 4e-101 100
vanRB YP_005355978.1 DNA-binding response regulator VanRB AE016830.1.gene2255. Protein 4e-97 97
vanRB YP_005355978.1 DNA-binding response regulator VanRB U35369.1.gene1.p01 Protein 4e-97 97
vanRB YP_005355978.1 DNA-binding response regulator VanRB HE999704.1.gene1202. Protein 7e-49 47