Gene Information

Name : vanYB (EFAU004_02778)
Accession : YP_005355976.1
Strain : Enterococcus faecium Aus0004
Genome accession: NC_017022
Putative virulence/resistance : Resistance
Product : VanY protein, D-alanyl-D-alanine carboxypeptidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.16.4
Position : 2842211 - 2843017 bp
Length : 807 bp
Strand : -
Note : van locus

DNA sequence :
ATGGAAAAAAGCAACTATCATTCCAATGCGGATCATCACAAACGGCATATGAAACAATCCGTGGAAAAGCGGGCTTTTCT
ATGTGCGTTCATTATTTCGTTCACAGTCTGCACGCTGTTTTTGGGGTGGAGACTGGCTTCCGTATTGGAGGCAACACAGA
TACCGCCCATCCCTGCAACTCATACAGGCAGCAGCACTGACGTAGTGGAGAATTTGGAGGAAAACGCTCTTGCCACCGCC
AAAGAACAGGGAGATGAACAGGAATGGAGCCTGATTTTAGTGAACAGGCAGAACCCCATCCCCGCACAGTACGATGTGGA
GCTTGAGCAACTATCAAATGGTGAGCGGATAGATATTCGGATTTCTCCCTATCTTCAAGATTTGTTTGATGCCGCAAGAA
CTGATGGAGTTTACCCGATTGTCGCATCCGGATACCGAACAACAGAAAAACAGCAAGAAATTATGGATGAAAAAATTGCC
GAATATAAGGCGAAAGGCTACACCTCTGCACAGGCTAAAGCGGAAGCAGAAACTTGGGTGGCCGTGCCGGGAACGAGCGA
GCATCAGCTTGGTCTTGCTGTGGATATCAATGCGGACGGAATTCATTCAACAGGCAACGAGGTTTATAGATGGCTGGATG
AAAACAGCTATCGTTTTGGTTTTATTCGTCGCTACCCACCAGACAAGACAGAGATAACCGGTGTGAGCAACGAGCCGTGG
CATTACCGATATGTTGGCATCGAAGCTGCCACAGAGATGTACAACCAAGGGGTTTGCCTTGAGGAATATTTAAAACCAGA
AAAATGA

Protein sequence :
MEKSNYHSNADHHKRHMKQSVEKRAFLCAFIISFTVCTLFLGWRLASVLEATQIPPIPATHTGSSTDVVENLEENALATA
KEQGDEQEWSLILVNRQNPIPAQYDVELEQLSNGERIDIRISPYLQDLFDAARTDGVYPIVASGYRTTEKQQEIMDEKIA
EYKAKGYTSAQAKAEAETWVAVPGTSEHQLGLAVDINADGIHSTGNEVYRWLDENSYRFGFIRRYPPDKTEITGVSNEPW
HYRYVGIEAATEMYNQGVCLEEYLKPEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanYB YP_008394256.1 VanY protein, D-alanyl-D-alanine carboxypeptidase Not tested Not named Protein 2e-123 100
vanYB NP_815954.1 D-alanyl-D-alanine carboxypeptidase Not tested Not named Protein 2e-115 93

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vanYB YP_005355976.1 VanY protein, D-alanyl-D-alanine carboxypeptidase AF310956.2.orf2.gene Protein 7e-124 100
vanYB YP_005355976.1 VanY protein, D-alanyl-D-alanine carboxypeptidase AE016830.1.gene2253. Protein 8e-116 93
vanYB YP_005355976.1 VanY protein, D-alanyl-D-alanine carboxypeptidase U35369.1.gene3.p01 Protein 8e-116 93
vanYB YP_005355976.1 VanY protein, D-alanyl-D-alanine carboxypeptidase DQ212986.1.gene6.p01 Protein 5e-50 54
vanYB YP_005355976.1 VanY protein, D-alanyl-D-alanine carboxypeptidase AF253562.2.orf2.gene Protein 4e-44 50