Gene Information

Name : vanXB (EFAU004_02774)
Accession : YP_005355972.1
Strain : Enterococcus faecium Aus0004
Genome accession: NC_017022
Putative virulence/resistance : Resistance
Product : D-alanyl-D-alanine dipeptidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.13.22
Position : 2838763 - 2839371 bp
Length : 609 bp
Strand : -
Note : van locus

DNA sequence : 
ATGGAAAATGGTTTTTTGTTTTTAGATGAAATGTTGCATGGCGTCCGTTGGGATGCCAAGTACGCCACATGGGATAACTT
CACAGGAAAACCGGTGGATGGGTATGAGGTGAATCGCATCATCGGCACAAAGGCCGTGGCGTTTGCTCTGCGCGAGGCAC
AAATCCATGCGGCTGCGCTTGGCTATGGCTTGCTTTTATGGGATGGATATCGGCCAAGAACTGCGGTGGACTGCTTCCTG
CGTTGGGCAGCGCAACCGGAGGACAATCTCACAAAAGAAAAATTTTACCCCAATATAGAGCGAGCCGAGTTGATTACAAA
GGGTTATGTGGCCTCACAATCCAGCCATAGCCGTGGAAGCGCAATTGATCTTACGCTCTACCACCTGGATACAGGGGAAC
TTGTTTCAATGGGAAGTAACTTCGATTTTATGGACGAACGGTCGCATCATACAGCAAAAGGGATAGGGGATGCAGAGGCA
CAAAATCGAAGATGCTTGCGTAAAATCATGGAAAGCAGCGGATTTCAGTCTTATCGCTTTGAATGGTGGCACTATAAGTT
GATTGATGAGCCATACCCCGATACCTATTTTAATTTTGCCGTTTCATAA

Protein sequence : 
MENGFLFLDEMLHGVRWDAKYATWDNFTGKPVDGYEVNRIIGTKAVAFALREAQIHAAALGYGLLLWDGYRPRTAVDCFL
RWAAQPEDNLTKEKFYPNIERAELITKGYVASQSSHSRGSAIDLTLYHLDTGELVSMGSNFDFMDERSHHTAKGIGDAEA
QNRRCLRKIMESSGFQSYRFEWWHYKLIDEPYPDTYFNFAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 8e-92 100
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 2e-90 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase AF310956.2.orf6.gene Protein 3e-92 100
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase AE016830.1.gene2249. Protein 5e-91 98
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase U35369.1.gene7.p01 Protein 2e-90 97
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase NC_005054.2598281.p0 Protein 5e-72 75
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase M97297.gene.p01 Protein 5e-72 75
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase NC_014475.1.orf4.gen Protein 5e-72 75
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase FJ349556.1.orf5.gene Protein 6e-70 74
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase AF155139.2.orf6.gene Protein 6e-72 74
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase AF130997.1.orf5.gene Protein 8e-74 70
vanXB YP_005355972.1 D-alanyl-D-alanine dipeptidase U82965.2.orf32.gene. Protein 9e-66 66