Gene Information

Name : rlmH (EFAU004_00282)
Accession : YP_005353486.1
Strain : Enterococcus faecium Aus0004
Genome accession: NC_017022
Putative virulence/resistance : Unknown
Product : ribosomal RNA large subunit methyltransferase H
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.1.-
Position : 280335 - 280814 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGAATATCAAAATTATCTCAGTAGGAAAATTAAAAGAAAAATACCTGATCCAAGGTATCAATGAGTATGTCAAACGGCT
GAATGCCTATGCAAAAATCGAATTGATCGAAGTTCCTGACGAAAAAGCCCCGGAGAATTTAAGCGAAGCGCAAATGAGAC
AAGTAAAAGAAAAAGAAGGGGAACGGATCTTAGCGAAAATCAAAGAACAAGAATACGTCTATGCCTTAGCAATTGAAGGG
AAAAATCCTACAAGTGAATCTTTTGCTAAACAAATCGACCAATTAGGTATCCAAGGAAAAAGCCACCTTGTTTTTGTTAT
CGGCGGCTCTTTAGGACTCAGCGAAGCCGTCATGAAAAGAAGCAATGCTCAGATCTCTTTTGGAAAAATGACGTATCCAC
ATCAATTGATGCGTCTGATCCTTGTCGAGCAAATCTACCGTGCCTTCCGGATCAATGCGGGGGCGCCTTATCATAAGTGA

Protein sequence :
MNIKIISVGKLKEKYLIQGINEYVKRLNAYAKIELIEVPDEKAPENLSEAQMRQVKEKEGERILAKIKEQEYVYALAIEG
KNPTSESFAKQIDQLGIQGKSHLVFVIGGSLGLSEAVMKRSNAQISFGKMTYPHQLMRLILVEQIYRAFRINAGAPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 9e-44 61
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 2e-45 61
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 1e-44 61
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 9e-44 61
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 1e-44 60
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 1e-44 60
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 1e-44 60
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-44 60
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-44 60
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-44 60
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-44 60
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 1e-44 60
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 1e-44 60
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 1e-44 60
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 5e-41 60
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 1e-44 60
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 1e-44 60
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 9e-44 59
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 3e-27 57