Gene Information

Name : EFAU004_01286 (EFAU004_01286)
Accession : YP_005354488.1
Strain : Enterococcus faecium Aus0004
Genome accession: NC_017022
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1327564 - 1328250 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCAATATTCTAATCATTGAAGATGAAAAGAACTTGGCACGATTTGTCGAGCTAGAGTTGAAGCATGAAGGGTATAA
CGCAGAAGTCCACTACAACGGCCGAACTGGTTTAGATGCGGCATTAAATAATGAGTGGGATGCCATATTGTTGGATCTGA
TGCTCCCAGAATTGAACGGTTTAGAAGTCTGCAGACGTGTACGCCAAGTCAAAAATACACCAATCATTATGATGACTGCA
AGAGATTCTGTGATCGATCGTGTATCTGGACTTGACCACGGAGCAGATGACTACATCGTCAAACCATTTGCTATCGAAGA
ATTATTAGCACGTCTTCGTGCATTGTTGCGTCGAATCGATATTGAAGGCGATAAAAATGTGGCTAAACAAACTACTATTA
CTTATCGCGATTTGACTATCGAAAAAGAAAACCGTGTCGTACGTCGCGGAAATGAAGTAATTGAACTAACAAAAAGAGAA
TACGAGTTGCTGCTTACTTTAATGGAAAACGTGAACGTGGTATTAGCACGTGACGTTTTACTAAATAAAGTGTGGGGATA
CGAAACAGAAGTTGAAACAAACGTAGTGGACGTATATATTCGTTATCTTCGCAACAAAATTGACGTTCCCGGGGAGGAAA
GCTATATCCAAACTGTACGCGGAACAGGTTATGTGATGCGCTCGTGA

Protein sequence : 
MSNILIIEDEKNLARFVELELKHEGYNAEVHYNGRTGLDAALNNEWDAILLDLMLPELNGLEVCRRVRQVKNTPIIMMTA
RDSVIDRVSGLDHGADDYIVKPFAIEELLARLRALLRRIDIEGDKNVAKQTTITYRDLTIEKENRVVRRGNEVIELTKRE
YELLLTLMENVNVVLARDVLLNKVWGYETEVETNVVDVYIRYLRNKIDVPGEESYIQTVRGTGYVMRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-29 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-29 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-29 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFAU004_01286 YP_005354488.1 DNA-binding response regulator HE999704.1.gene1528. Protein 4e-78 79
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 3e-49 56
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 3e-49 56
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 3e-49 56
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 3e-49 56
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 3e-49 56
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 3e-49 56
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 3e-49 56
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 3e-49 56
EFAU004_01286 YP_005354488.1 DNA-binding response regulator AE015929.1.gene1106. Protein 1e-44 54
EFAU004_01286 YP_005354488.1 DNA-binding response regulator BAC0308 Protein 2e-30 43
EFAU004_01286 YP_005354488.1 DNA-binding response regulator BAC0125 Protein 3e-29 42
EFAU004_01286 YP_005354488.1 DNA-binding response regulator BAC0197 Protein 4e-27 42
EFAU004_01286 YP_005354488.1 DNA-binding response regulator NC_012469.1.7685629. Protein 1e-36 41
EFAU004_01286 YP_005354488.1 DNA-binding response regulator BAC0083 Protein 5e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFAU004_01286 YP_005354488.1 DNA-binding response regulator VFG1390 Protein 1e-36 44
EFAU004_01286 YP_005354488.1 DNA-binding response regulator VFG1389 Protein 5e-32 43
EFAU004_01286 YP_005354488.1 DNA-binding response regulator VFG0596 Protein 1e-29 42
EFAU004_01286 YP_005354488.1 DNA-binding response regulator VFG1702 Protein 2e-29 42
EFAU004_01286 YP_005354488.1 DNA-binding response regulator VFG1563 Protein 2e-29 41