Gene Information

Name : PECL_1949 (PECL_1949)
Accession : YP_005353109.1
Strain :
Genome accession: NC_017019
Putative virulence/resistance : Virulence
Product : site-specific recombinase, resolvase family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4440 - 5096 bp
Length : 657 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAGTTGGTTATGCGCGAGTTAGCTCAACTGATCAAAATTTGGCCCGCCAAATTAAAGCCTTGAAAGTGGCTAGATG
TGAGAAAATCTTTGAAGAAAAACAATCGGGCAAATCGACCCAAAACCGACCAGAATTACAGGCGGCGATTGCTTATGTGC
GGCAAGGAGATACATTAGTAGTGGCCTCATTAGATCGGCTTAGTCGAAACTATGACGACGCCAGTGATATAATCAAGCAG
ATCAGAGATAAACAGGTTAGAATGGAAGTCTTAGATGCCCCATTTCTTTCAATGCAGACTGGAGATTCAGATATGGACAA
ATTTATGTTTGATATGCTAACCAAGCTGTTAGCTTATATGGCGCAAACTGAGCGAAAAAAGATTCGGGAACGTCAGCGGC
AAGGAATTGAGATTGCCAAAGCCAATGGGAAATATCGAGGGACTCGGCCCGCTTACGCCGCAGACGCACCTAACCCACAA
AAACGGTTTATCTACCATCGTATCGTTGATCAATTAAGAAACAAAGCAACCGGTGCCCCAATTAGTTATCGAGCGATTGC
GGCTGAAACCGGCGTCTCGGTGCAGACAGTGATTAATATTAAAAATCGGATGAATCAGATGTTATCTGAGAAGAAAACTT
TTAGCTCGCGAGATTAG

Protein sequence : 
MKVGYARVSSTDQNLARQIKALKVARCEKIFEEKQSGKSTQNRPELQAAIAYVRQGDTLVVASLDRLSRNYDDASDIIKQ
IRDKQVRMEVLDAPFLSMQTGDSDMDKFMFDMLTKLLAYMAQTERKKIRERQRQGIEIAKANGKYRGTRPAYAADAPNPQ
KRFIYHRIVDQLRNKATGAPISYRAIAAETGVSVQTVINIKNRMNQMLSEKKTFSSRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sin YP_254225.1 recombinase Sin Not tested ¥ðSh1 Protein 1e-38 47
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 8e-23 43
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 1e-22 42
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 3e-21 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 3e-21 41
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 4e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PECL_1949 YP_005353109.1 site-specific recombinase, resolvase family VFG1030 Protein 1e-21 41