Gene Information

Name : OCQ_30310 (OCQ_30310)
Accession : YP_005348864.1
Strain : Mycobacterium intracellulare MOTT-64
Genome accession: NC_016948
Putative virulence/resistance : Unknown
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 3214321 - 3217566 bp
Length : 3246 bp
Strand : +
Note : -

DNA sequence :
GTGGGTGTCATCGCCACCGTGTCGCTGCTGGGCAGTGTGTCCCCCCTGATCCGTTACCTGATCAAGGTTCCGCGCGAGTT
CATCAACGACTATCTGTTCAACTTCCCCGACACCAGCATCGCGTGGTCGTTCGTGTTGGCCTTGTTGGCCGCGGCCCTGA
CCGCGCGCAAGCGGATCGCCTGGCTGCTGTTGCTGGGCAACATGATTCTCGCCGCCGGCCTGAACGCCGCCGATATCGCC
GCCGGGGACAACACCGCCGCCGAGATCTTGGGCGAGAATCTCGGGTTCGCCCTGCACATCGTCGCGATCGTCCTGCTGGT
GTTGGCCTATCGGGAGTTCTGGGCCAAGGTCCGCCGGGGCGCGCTGGTCAAGGCGGCCGGCGTGCTGGTGGCCGGCGATG
TGGTGGGGATCTTGGTGTCCTGGGGCCTGGTCGAGTTGTTCCCCGGAACGCTGGCCCGCCCGGATCGCCTGCCCTACGTG
GCCAACCGGGTGGTCGGATTCGCGCTCGCCGATCCGGACCTGTTCACCGGCCGGCCGCACGTGTTCCTCAACGCGATCTT
CGGTCTGTTCGGCGCGCTCGCGCTGATCATGGCGACGATCGTGCTCTTTCAATCTCAGCGCGCGGAGAACGCGCTCACCG
GCGAGGACGAATCGGCCATCCGCGGGCTGCTCGAGCTGTACGGCAAGAACGACTCCCTGGGCTACTTCGCCACCCGCCGC
GACAAGTCGGTGGTTTTCGCCCAGAGCGGGCGCGCCGCCATCACCTACCGGGTCGAGGTCGGCGTCTGCCTGGCCAGCGG
CGACCCGATCGGCGATCCCCGGGCGTGGTCCCAGGCCGCCGACGCCTGGCTGGGTCTGTGCCAAACCTACGGCTGGGCGC
CCGGCGTCATGGGCGCCAGCACCCAGGGGGCGCGGACATATCGCGAAGCCGGCCTGAACGCGCTGGAGCTCGGCGACGAG
GCCATCCTGCGGACCGCCGACTTCAAGCTGTCCGGCCCCGACATGCGCGGAGTCCGACAGGCCGTGACCCGCGCCCGCCG
GGCCGGCCTGACCGTGCGGATCCGGCGGCACCGCGACATCGGCGCCGACGAGATGGCCGACACCATCACCCGCGCCGACG
CCTGGCGCGACACCCAAACCGAGCGCGGGTTTTCCATGGCGCTGGGCCGCCTCGGCGACCCCGCCGACGGGGACTGCCTG
CTGGTCGAGGCCCTGGACCGGGACGGCGCCGTCGTCGCGATGCTGTCGCTGGTCCCGTGGGGAACCACCGGCGTCTCCCT
GGACCTGATGCGCCGATCGCCCCAGTCCCCCAACGGCACCATCGAGCTGATGGTCAGCGACCTCGCACTCAACGCGGAAA
ACCTTGGCATCACCCGCATTTCACTGAACTTCGCGATGTTCCGCTCGGCTTTCGAACAGGGTGCCCAACTGGGCGCCGGC
CCCGTCGCGCGGCTGTGGCGCGGGTTTTTGCTGTTCTTCTCGCGGTGGTGGCAGCTGGAGACGCTGTATCGCTCCAACAT
GAAGTACCAGCCCGAATGGGTGCCGCGGTATGCCTGCTACGAGGACGCCCGCCTGATCCCGCGGGTCGGGGTCGCCTCGG
CGCTGGCCGAGGGCTTCCTCGTCCTGCCGTTCGGCCGGCGCAAGCCGCACACGGGTCACCACCCGGCCGTCCCCGCCCGG
CTGGCCGCGTCCGGGCTGCTGCACCACGACGGGAGCGCGCCGGACGTCAGCGGGCTGCAGAGGCGCCAGGAGTCGGCCGA
CGAGGAAGAGGCGAGATCCCGGCTGCCCGAGCAGGTTCGGGTGCGCCTGGCCAAGTTGAAGGTGTTGCGGCGCAAGGGCA
TCGACGCGTATCCGGTGGGCCATCCGCCCAGTCACACCGTCGCCGCGGCGCTCGACACGGACGACCGGGAGACGATCACC
GTCTCCGGCCGGATACTGCGAATACGCGACTACGGCGGGGTGCTATTCGCCCACCTTCGTGACTGGTCGGGGGAAATGCA
AGTGCTGCTGGACAATTCGCAGTTGCAGCGCGGGCGAACGGCCGACTTCACGGCGGCCATCGATCTTGGCGACTTGGTCG
AGGTCTCCGGCCACATGGGCTTTTCCAAGAAGGGAACCCGCTCGCTGATCGTCGGCGACTGGCGGATGATCGGTAAGTGC
TTGCGGCCGTTGCCCAACAAGTGGAAGGGGCTCACCGATCCGGAGGCCCGGGTGCGGACCCGCTACGTCGACCTGGCGGT
CAATCCCGAGTCTCGCGAATTGATCACGGCACGCAGCGAGGTGTTGCGCTCGGTCCGGCAGACGCTGTTCGACAAGGGGT
TCATCGAAGTCGAGACCCCGATCCTGCAGCAGATCCACGGCGGAGCCACCGCCCGGCCGTTCGTCACGCACATCAACACC
TACGACATGGACCTGTTCCTGCGGATCGCGCCGGAGCTCTACCTCAAGCGGTTATGCGTCGGCGGCGTCGAGCGGGTCTT
CGAGCTGGGCCGGGCCTTCCGCAACGAGGGCGTGGACTTCAGCCACAACCCGGAGTTCACCCTCCTGGAGGCGTATCAGG
CGCACGCCGACTACAAGGTCTGGATCGACGGGTGCCGCGAGCTGATCCAGAACGCCGCCGAGGCCGCCCACGGCGAGCAG
GCCGTCATGCGCCCCCGCGACCAAGGCACCGGTGGCGGCCTCAAGCCGGTCGACATCTCCGGCGTGTGGGCGGTCAAGAC
CGTGTACGACGCCGTCTCCGAAGCACTCGGCGAGCACATCGACCCCGCCACGCCGCTGCCCGCGCTGCGCAAGCTGTCGG
ATGCCGCGCACATTCCGTATCGGGCGCACTGGGACGCCGGGGCGGTGGTGCTGGAGCTGTACGAGCATCTGGTCGAGGAC
CGGACCGAGGAGCCGACGTTCTATATCGACTTCCCGACGTCGGTGTCGCCACTGACCCGCCCGCATCGCAGCGAGCCCGG
CGTCGCCGAGCGGTGGGACCTGGTGGCGTGGGGTGTCGAGCTGGCCACCGCCTACAGCGAGCTCACCGATCCGGTGGAAC
AGCGTCGCCGCCTGCAGGAGCAGTCGCTGTTGGCCGCGGGTGGGGATCCCGAGGCGATGGAGCTCGACGAAGACTTCCTG
CAGGCGATGGAATACGCGATGCCGCCCACCGGCGGACTCGGGATGGGCGTCGATCGCCTCGTCATGCTCATAACGGGTCG
CAGCATCCGGGAGACGCTGCCGTTCCCGCTGGCCAAACCCCATTGA

Protein sequence :
MGVIATVSLLGSVSPLIRYLIKVPREFINDYLFNFPDTSIAWSFVLALLAAALTARKRIAWLLLLGNMILAAGLNAADIA
AGDNTAAEILGENLGFALHIVAIVLLVLAYREFWAKVRRGALVKAAGVLVAGDVVGILVSWGLVELFPGTLARPDRLPYV
ANRVVGFALADPDLFTGRPHVFLNAIFGLFGALALIMATIVLFQSQRAENALTGEDESAIRGLLELYGKNDSLGYFATRR
DKSVVFAQSGRAAITYRVEVGVCLASGDPIGDPRAWSQAADAWLGLCQTYGWAPGVMGASTQGARTYREAGLNALELGDE
AILRTADFKLSGPDMRGVRQAVTRARRAGLTVRIRRHRDIGADEMADTITRADAWRDTQTERGFSMALGRLGDPADGDCL
LVEALDRDGAVVAMLSLVPWGTTGVSLDLMRRSPQSPNGTIELMVSDLALNAENLGITRISLNFAMFRSAFEQGAQLGAG
PVARLWRGFLLFFSRWWQLETLYRSNMKYQPEWVPRYACYEDARLIPRVGVASALAEGFLVLPFGRRKPHTGHHPAVPAR
LAASGLLHHDGSAPDVSGLQRRQESADEEEARSRLPEQVRVRLAKLKVLRRKGIDAYPVGHPPSHTVAAALDTDDRETIT
VSGRILRIRDYGGVLFAHLRDWSGEMQVLLDNSQLQRGRTADFTAAIDLGDLVEVSGHMGFSKKGTRSLIVGDWRMIGKC
LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELITARSEVLRSVRQTLFDKGFIEVETPILQQIHGGATARPFVTHINT
YDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYKVWIDGCRELIQNAAEAAHGEQ
AVMRPRDQGTGGGLKPVDISGVWAVKTVYDAVSEALGEHIDPATPLPALRKLSDAAHIPYRAHWDAGAVVLELYEHLVED
RTEEPTFYIDFPTSVSPLTRPHRSEPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFL
QAMEYAMPPTGGLGMGVDRLVMLITGRSIRETLPFPLAKPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lysS1 YP_005682181.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 2e-160 44
lysS1 YP_005684273.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 7e-161 44
lysX YP_003784331.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 7e-161 44
lysS1 YP_005686365.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 7e-161 44