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Name : OCO_29650 (OCO_29650) Accession : YP_005343649.1 Strain : Mycobacterium intracellulare MOTT-02 Genome accession: NC_016947 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3142321 - 3145566 bp Length : 3246 bp Strand : + Note : - DNA sequence : GTGGGTGTCATCGCCACCGTGTCGCTGCTGGGCAGTGTGTCCCCCCTGATCCGTTACCTGATCAAGGTGCCGCGCGAGTT CATCAACGACTATCTGTTCAACTTCCCCGACACCAGCATCGCGTGGTCGTTCGTGTTGGCCTTGTTGGCTGCGGCCCTGA CCGCGCGCAAGCGGATCGCCTGGCTGCTGTTGCTGGGCAACATGATTCTCGCCGCCGGCCTGAACGCCGCCGATATCGCC GCCGGGGGCAACACCGCCGCCGAGATCTTGGGCGAGAATCTCGGGTTCGCTCTGCACATCGTCGCGATCGTCCTGCTGGT GTTGGCCTATCGGGAGTTCTGGGCCAAGGTCCGCCGGGGCGCGCTGGTCAAGGCGGCCGGCGTGCTGGTGGCCGGCGATG TGGTGGGGATCTTGGTGTCCTGGGGCCTGGTCGAGTTGTTCCCCGGAACGCTGGCCCGCCCGGATCGCCTGCCCTACGTG GCCAACCGGGTGGTCGGATTCGCGCTCGCCGATCCGGACCTGTTCACCGGCCGGCCGCACGTGTTCCTCAACGCGATCTT CGGTCTGTTCGGCGCGCTCGCGCTGATCATGGCGACGATCGTGCTCTTTCAATCGCAGCGCGCGGAGAACGCGCTCACCG GCGAGGACGAATCGGCCATCCGCGGGCTGCTCGAGCTGTACGGCAAGAACGACTCCCTGGGCTACTTCGCCACCCGCCGC GACAAGTCGGTGGTATTCGCCCAGAGCGGGCGCGCCGCCATCACCTACCGGGTCGAGGTCGGCGTCTGCCTGGCCAGCGG CGACCCGATCGGCGATCCCCGGGCGTGGTCCCAGGCCGCCGACGCCTGGCTGGGTCTGTGCCAAACCTACGGCTGGGCGC CCGGCGTCATGGGCGCCAGCACCCAGGGGGCGCGGACATATCGCGAAGCCGGCCTGAACGCGCTGGAGCTCGGCGACGAG GCCATCCTGCGGACCGCCGACTTCAAGCTGTCCGGCCCCGACATGCGCGGAGTCCGACAGGCCGTGACCCGCGCACGTCG GGCCGGCCTGACCGTGCGGGTCCGGCGGCACCGCGACATCGGCGCCGACGAGATGGCCGACACCATCACCCGCGCCGACG CCTGGCGCGACACCCAAACCGAGCGCGGGTTTTCCATGGCGCTGGGCCGCCTCGGCGACCCCGCCGACGGGGACTGCCTG CTGGTCGAGGCCCTGGACCGGGACGGCGCCGTCGTCGCGATGCTGTCGCTGGTCCCGTGGGGAACCACCGGCGTCTCCCT GGACCTGATGCGCCGATCGCCCCAGTCCCCCAACGGCACCATCGAGCTGATGGTCAGCGACCTCGCACTCAACGCGGAAA ACCTTGGCATCACCCGCATTTCACTGAACTTCGCGATGTTCCGCTCGGCTTTCGAACAGGGTGCCCAACTGGGCGCCGGC CCCGTCGCGCGGCTGTGGCGCGGGTTTTTGCTGTTCTTCTCGCGGTGGTGGCAGCTGGAGACGCTGTATCGCTCCAACAT GAAGTACCAGCCCGACTGGGTGCCGCGGTACGCCTGCTACGAGGACGCCCGCCTGATCCCGCGGGTCGGGGTCGCCTCGG CGCTGGCCGAGGGCTTCCTCGTCCTGCCGTTCGGCCGGCGCAAGCCGCACACGGGTCACCACCCGGCCGTCCCTGCCCGG CTGGCCGCGTCCGGGCTGCTGCACCACGACGGGAGCGCGCCGGACGTCAGCGGGCTGCAGAGGCGCCAGGAGTCGGCCGA CGAGGAAGAGGCGAGATCCCGGCTGCCCGAGCAGGTTCGGGTGCGCCTGGCCAAGTTGAAGGTGTTGCGGCGCAAGGGCA TCGACGCGTATCCGGTGGGCCATCCGCCCAGTCACACCGTCGCCGCGGCGCTCGACACGGACGACCGGGAGACGATCACC GTCTCCGGCCGGATACTGCGAATACGCGACTACGGCGGGGTGCTATTCGCCCACCTGCGTGACTGGTCGGGGGAAATGCA AGTGCTGCTGGACAATTCGCAGTTGCAGCGCGGGCGAACGGCCGACTTCACGGCGGCCATCGATCTCGGCGACTTGGTCG AGGTCTCCGGCCACATGGGCTTTTCCAAGAAGGGAACCCGCTCGCTGATCGTCGGCGACTGGCGGATGATCGGTAAGTGC TTGCGGCCGTTGCCCAACAAGTGGAAGGGGCTGACCGATCCGGAGGCCCGGGTGCGGACCCGCTACGTCGACCTGGCGGT CAATCCCGAGTCTCGCGAATTGATCACGGCACGCAGCGAGGTGTTGCGCTCGGTCCGGCAGACGCTGTTCGACAAGGGGT TCATCGAAGTCGAGACCCCGATCCTGCAGCAGATCCACGGCGGAGCCACCGCCCGGCCGTTCGTCACGCACATCAACACC TACGACATGGACCTGTTCCTGCGGATCGCGCCGGAGCTCTACCTCAAGCGGTTATGCGTCGGCGGCGTCGAGCGGGTCTT CGAGCTGGGCCGGGCCTTCCGCAACGAGGGCGTGGACTTCAGCCACAACCCGGAGTTCACCCTGCTGGAGGCGTATCAGG CGCACGCCGACTACAAGGTCTGGATCGACGGGTGCCGCGAGCTGATCCAGAACGCCGCCGAGGCCGCCCACGGCGAGCAG GCCGTCATGCGCCCCCGCGACCAAGGCACCGGTGGCGGCCTCGAGCCGGTCGACATCTCCGGCGTGTGGGCGGTCAAGAC CGTGTACGACGCCGTCTCCGAAGCGCTCGGCGAGCACATCGACCCCGCCACGCCGCTGCCCGCGCTGCGCAAGCTGTCGG ATGCCGCGCACATTCCGTATCGGGCGCACTGGGACGCCGGGGCGGTGGTGCTGGAGCTGTACGAGCATCTGGTCGAGGAC CGGACCGAGGAACCGACGTTCTATATCGACTTCCCGACGTCGGTGTCGCCACTGACCCGCCCGCATCGCAGCGAGCCCGG CGTCGCCGAGCGGTGGGACCTGGTGGCGTGGGGTGTCGAGCTGGCCACCGCCTACAGCGAGCTCACCGATCCGGTGGAAC AGCGTCGCCGCCTGCAGGAGCAGTCGCTGTTGGCCGCGGGTGGGGATCCCGAGGCGATGGAGCTCGACGAAGACTTCCTG CAGGCGATGGAATACGCGATGCCGCCCACCGGCGGACTCGGGATGGGCGTCGATCGCCTCGTCATGCTCATAACGGGTCG CAGCATCCGGGAGACGCTGCCGTTCCCGCTGGCCAAACCCCATTGA Protein sequence : MGVIATVSLLGSVSPLIRYLIKVPREFINDYLFNFPDTSIAWSFVLALLAAALTARKRIAWLLLLGNMILAAGLNAADIA AGGNTAAEILGENLGFALHIVAIVLLVLAYREFWAKVRRGALVKAAGVLVAGDVVGILVSWGLVELFPGTLARPDRLPYV ANRVVGFALADPDLFTGRPHVFLNAIFGLFGALALIMATIVLFQSQRAENALTGEDESAIRGLLELYGKNDSLGYFATRR DKSVVFAQSGRAAITYRVEVGVCLASGDPIGDPRAWSQAADAWLGLCQTYGWAPGVMGASTQGARTYREAGLNALELGDE AILRTADFKLSGPDMRGVRQAVTRARRAGLTVRVRRHRDIGADEMADTITRADAWRDTQTERGFSMALGRLGDPADGDCL LVEALDRDGAVVAMLSLVPWGTTGVSLDLMRRSPQSPNGTIELMVSDLALNAENLGITRISLNFAMFRSAFEQGAQLGAG PVARLWRGFLLFFSRWWQLETLYRSNMKYQPDWVPRYACYEDARLIPRVGVASALAEGFLVLPFGRRKPHTGHHPAVPAR LAASGLLHHDGSAPDVSGLQRRQESADEEEARSRLPEQVRVRLAKLKVLRRKGIDAYPVGHPPSHTVAAALDTDDRETIT VSGRILRIRDYGGVLFAHLRDWSGEMQVLLDNSQLQRGRTADFTAAIDLGDLVEVSGHMGFSKKGTRSLIVGDWRMIGKC LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELITARSEVLRSVRQTLFDKGFIEVETPILQQIHGGATARPFVTHINT YDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYKVWIDGCRELIQNAAEAAHGEQ AVMRPRDQGTGGGLEPVDISGVWAVKTVYDAVSEALGEHIDPATPLPALRKLSDAAHIPYRAHWDAGAVVLELYEHLVED RTEEPTFYIDFPTSVSPLTRPHRSEPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFL QAMEYAMPPTGGLGMGVDRLVMLITGRSIRETLPFPLAKPH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-160 | 43 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 4e-161 | 43 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 4e-161 | 43 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 4e-161 | 43 |
