Gene Information

Name : OCO_26310 (OCO_26310)
Accession : YP_005343315.1
Strain : Mycobacterium intracellulare MOTT-02
Genome accession: NC_016947
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2751874 - 2752485 bp
Length : 612 bp
Strand : +
Note : -

DNA sequence :
GTGTTCACCACGATCAGCGACCCGGCCGCGATCCGGCCGGCCGATCTGGTCAACCGCCAATTCCGGGCTGCTGCACCGAA
CCGGCTATGGGTCGCCGACATCACGTTCGTGCGGACCTGGCAGGGGTTCTGTTACACCGCGTTCGTCACTGATGCGTGCA
CGAAGAAGATCGTTGGCTGGGCGGTCTCGGCCACGATGCGCACCGAAGACCTCCCACTTCAAGCATTCAATCACGCTGTG
TGGCAGTCGAATACCGATCTATCCGAGTTGGTTCATCATTCCGACCGCGGATCCCAGTACCTATCGCTGGCCTATACCGA
CCGGCTGGCTGAACTGGGGATCGCGCCCTCGGTCGGGTCGCGTGGCGATAGTTATGACAACGCCCTCGCTGAAGCGGTCA
ACGCCGCCTACAAGACCGAGCTCATCAACCGCGGCAAGCCCTGGCGGTGCATCGATGATGTCGAACTCTCGACCGCCGAA
TGGGTGGCCTGGTACAACCAGGAACGCCTGCACGAAGGCCTCGGCTACGTTCCACCCGCCGAGTACGAGGCCGCCCTCAC
CGGCACCTCACACCATGCGAGCCAGCCGACCCCGGCCCTCGCAACCGAGTAG

Protein sequence :
MFTTISDPAAIRPADLVNRQFRAAAPNRLWVADITFVRTWQGFCYTAFVTDACTKKIVGWAVSATMRTEDLPLQAFNHAV
WQSNTDLSELVHHSDRGSQYLSLAYTDRLAELGIAPSVGSRGDSYDNALAEAVNAAYKTELINRGKPWRCIDDVELSTAE
WVAWYNQERLHEGLGYVPPAEYEAALTGTSHHASQPTPALATE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 5e-39 53
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 3e-38 53
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-38 53
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 3e-38 53
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 4e-33 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCO_26310 YP_005343315.1 integrase catalytic subunit VFG1715 Protein 1e-33 52