Gene Information

Name : OCO_11020 (OCO_11020)
Accession : YP_005341786.1
Strain : Mycobacterium intracellulare MOTT-02
Genome accession: NC_016947
Putative virulence/resistance : Unknown
Product : integrase core domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1094063 - 1095187 bp
Length : 1125 bp
Strand : +
Note : -

DNA sequence :
ATGATCGCCTACATCGATGCTCATCGCGATCAGTTCGGGGTCGAGCTCATCTGCCGAGTGCTGCGGGCAGCTATCCCCGG
ATTCCTCACCTCGCGGGGTTATCGGGCCGCGCGGACCCGACCACCGTCGGACCGGGAGATCCGCGATGAGCAGCTGATCG
CCGACCTTGAGGCGGTGCACCGGCAGAATTACTCGGTGTATGGGGTCAAGAAGATGCACGCGGCGATGACACGGCGTGGT
TGGCAGCTGGGCCGTGAACAAACCCGCCGGTTGATGCGCAAGGCCGGGTTGCGCGGCGCCCAGCGGGGCAAGCCGGTGTT
CACCACGATCAGCGACCCGGCCGCGATCCGGCCGGCCGATCTGGTCAACCGCCAATTCCGGGCTGCTGCACCGAACCGGC
TATGGGTCGCCGACATCACGTTCGTGCGGACCTGGCAGGGGTTCTGTTACACCGCGTTCGTCACTGATGCGTGCACGAAG
AAGATCGTTGGCTGGGCGGTCTCGGCCACGATGCGCACCGAAGACCTCCCACTTCAAGCATTCAATCACGCTGTGTGGCA
GTCGAATACCGATCTATCCGAGTTGGTTCATCATTCCGACCGCGGATCCCAGTACCTATCGCTGGCCTATACCGACCGGC
TGGCTGAACTGGGGATCGCGCCCTCGGTCGGGTCGCGTGGCGATAGTTATGACAACGCCCTCGCTGAAGCGGTCAACGCC
GCCTACAAGACCGAGCTCATCAACCGCGGCAAGCCCTGGCGGTGCATCGATGATGTCGAACTCTCGACCGCCGAATGGGT
GGCCTGGTACAACCAGGAACGCCTGCACGAAGGCCTCGGCTACGTTCCACCCGCCGAGTACGAGGCCGCCCTCACCGGCA
CCTCACACCATGCGAGCCAGCCGACCCCGGCCCTCGCAACCGACGTAGGAACTAAACCTGGGGTAGTTCATTCGGCTGGG
ACAGCCCCGCCCAAGTCCTCAACCGGCTACTGTCAAACCCGCCACAAACCACTGTTGCAACCAAACCTTGAAACCACCCG
GCGTGTCGCCGCCCAGGCTTCACACTCAAAGCCCGGGTTTCACACGCAAAGCCGGGACGCACCCAACGACGAGCGGCTCA
GCTGA

Protein sequence :
MIAYIDAHRDQFGVELICRVLRAAIPGFLTSRGYRAARTRPPSDREIRDEQLIADLEAVHRQNYSVYGVKKMHAAMTRRG
WQLGREQTRRLMRKAGLRGAQRGKPVFTTISDPAAIRPADLVNRQFRAAAPNRLWVADITFVRTWQGFCYTAFVTDACTK
KIVGWAVSATMRTEDLPLQAFNHAVWQSNTDLSELVHHSDRGSQYLSLAYTDRLAELGIAPSVGSRGDSYDNALAEAVNA
AYKTELINRGKPWRCIDDVELSTAEWVAWYNQERLHEGLGYVPPAEYEAALTGTSHHASQPTPALATDVGTKPGVVHSAG
TAPPKSSTGYCQTRHKPLLQPNLETTRRVAAQASHSKPGFHTQSRDAPNDERLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-74 54
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-48 47
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 8e-49 47
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-48 47
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-48 47
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-49 47
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-48 46
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-48 46
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 5e-48 46
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-49 46
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-49 46
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 3e-50 46
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-50 46
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-48 45
Z1198 NP_286733.1 transposase Not tested TAI Protein 4e-48 45
Z1638 NP_287141.1 transposase Not tested TAI Protein 4e-48 45
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-48 45
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCO_11020 YP_005341786.1 integrase core domain-containing protein VFG1602 Protein 1e-46 44