Gene Information

Name : OCU_50240 (OCU_50240)
Accession : YP_005340564.1
Strain : Mycobacterium intracellulare ATCC 13950
Genome accession: NC_016946
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5265370 - 5266800 bp
Length : 1431 bp
Strand : -
Note : -

DNA sequence :
ATGCGCGAATACCTGAAGTTCTACATCGACGGACGATGGGTCGACCCGGTGCGGCCCAACCCCTTCGAGGTGGAAAACCC
GGCGACCGAGCAGGTTTCGGGAAAGATCTCGCTGGGGTCGGCGGCCGACGTCGACGTGGCGGTTCAGGCCGCCCGGCGCG
CCTTCGCGGGCTGGTCGCTGAGCACCCGCGAACAGCGCCTGGACCTGTTGCAGTCCATCCTCGCCGAATACCAGAAGCGG
GCCGACGATCTCGCCGAGGCGGTCACCGAGGAGATCGGCGCGCCGCCCTCACTGGCCGCGGGCCCGCAGGTCTTCCTCGG
CATCGGCCACCTCACGACGGCCATCGACGTGCTGAAGAACTTCCCGTTCTCCGAACACAAAGGGGAGACCCTGATCGCCA
AGGAGCCGATCGGTGTCTGCGGCTTGATCACGCCGTGGAACTGGCCGATCAACCAGGTCGCCGTCAAGGTGTATCCGGCG
CTGGCCACCGGCTGCACCGTCGTCCTGAAACCCTCTGAGGTCGCGCCGTATTCGCCGTACATCTTCGCCGAGATCCTGGC
CGCCGCGGGCGTGCCGGCCGGGGTGTTCAATCTGGTCAACGGTGACGGCGCGGGCGTGGGCGCGGCGCTGGCGAGCCATC
CCGACATCGACATGGTGTCGTTCACCGGGTCCACCCGCGCCGGCATCGAGGTCGCCAAGAACGCCGCCCCGACGGTGAAG
CGAGTGACCCAGGAACTCGGCGGCAAGAGCCCCAACATCGTCCTCGACGATGGCGGCTTCGCCGACGGCGTCCGCGCGGG
CGTGGCCAACATGATGCCCAACTCCGGGCAGAGCTGTAACGCGCCGTCGCGCATGCTGGTGCCGAATTCACGGATGGCCG
AGGCCATTACGATCGCGCGCGAGGTGGCCGAACAGGTCAAGGTGGGCAGCGCCGACGACGCGACGGCGATCGGGCCGGTG
GCGTCGAGGACGCAGTTCGAGAAGGTGCAGCGGCTGATCCAGCAGGGCATCGACGAGGGCGCGACCGTGGTCGCGGGCGG
CCCGGGCCGACCGGCGGGGCTGGACACGGGGTACTACGTCAAGCCGACAGTCTTCGCGCATGTCACCAACGACATGACGA
TCGCGCGCGAGGAGATCTTCGGGCCGGTGCTGTGCATCCTCGGCTACGACGACATCGACCAGGCCGTCGAGATCGCCAAC
GACACCGAGTACGGCCTCGCCGGCTATGTCTCCGGGGCCGACCTCGACACGGCGCGCGAGGTTGCCCGCCGGATCCGCGC
GGGATGGGTGACGATCAATCACGCGTTCGACATGAACGCGCCGTTCGGCGGCTACAAGCGCAGCGGCAACGGCCGCGAAT
GGAGCGAATTCGGCTTCCACGAGTACCTGGAGGTCAAGAGCACCCTGGGCTACGCGCCCGGCAAGGCCTGA

Protein sequence :
MREYLKFYIDGRWVDPVRPNPFEVENPATEQVSGKISLGSAADVDVAVQAARRAFAGWSLSTREQRLDLLQSILAEYQKR
ADDLAEAVTEEIGAPPSLAAGPQVFLGIGHLTTAIDVLKNFPFSEHKGETLIAKEPIGVCGLITPWNWPINQVAVKVYPA
LATGCTVVLKPSEVAPYSPYIFAEILAAAGVPAGVFNLVNGDGAGVGAALASHPDIDMVSFTGSTRAGIEVAKNAAPTVK
RVTQELGGKSPNIVLDDGGFADGVRAGVANMMPNSGQSCNAPSRMLVPNSRMAEAITIAREVAEQVKVGSADDATAIGPV
ASRTQFEKVQRLIQQGIDEGATVVAGGPGRPAGLDTGYYVKPTVFAHVTNDMTIAREEIFGPVLCILGYDDIDQAVEIAN
DTEYGLAGYVSGADLDTAREVARRIRAGWVTINHAFDMNAPFGGYKRSGNGREWSEFGFHEYLEVKSTLGYAPGKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-47 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCU_50240 YP_005340564.1 hypothetical protein VFG0082 Protein 5e-48 44