Gene Information

Name : OCU_45580 (OCU_45580)
Accession : YP_005340098.1
Strain : Mycobacterium intracellulare ATCC 13950
Genome accession: NC_016946
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4786691 - 4788175 bp
Length : 1485 bp
Strand : -
Note : -

DNA sequence :
ATGTCGTATGAGTCTCGCTACGAGAACTTCATCGGGGGGCAGTGGGTTCCGCCGGCGCGGGGGCGCTACTTCGAGAACCC
GACACCGGTCACCGGCCAGACGTTCTGCGAGGTGGCCCGTTCGGATGAGGCCGACGTCGACAAGGCGCTCGACGCCGCCC
ACGCGGCCGCGCCGGCGTGGGGTAAGACGGCGCCGGCCGAGCGCGCCGCGATCCTGAACAAGATCGCCGACCGCATCGAC
GAACACACCGCCGCGCTGGCGGTGGCCGAGGTCTGGGACAACGGCAAGCCGATCCGCGAGGCGCTGGCCGCCGACATCCC
CTTGGCGGCCGACCACTTCCGGTACTTCGCCGCGGCGCTGCGCGCCCAGGAGGGCTCGCTGAGCCAGATCGACGACGACA
CCGTCGCCTACCACTTCCACGAGCCGCTCGGCGTGGTCGGGCAGATCATCCCGTGGAACTTCCCCATCCTGATGGGCGCC
TGGAAGCTGGCGCCCGCGTTGGCCGCCGGCAACGCGGTGGTGCTCAAACCCGCTGAGCAGACGCCGGTTTCGGTGCTCTA
CCTGATGTCGCTGATCGGCGACCTGCTGCCGCCCGGGGTGATCAACGTCGTCAGCGGGTTCGGCGCCGAGGCCGGTAAGC
CGCTGGCATCGAGCAACCGGATCGCCAAGATCGCGTTCACCGGCGAGACCACCACGGGGCGACTGATCATGCAGTACGCG
TCGCAGAACCTGATCCCGGTCACCCTCGAACTCGGGGGCAAGAGCCCCAACATCTTCTTCTCCGATGTGATGGCCAAGGC
CGACGACTATCAGGACAAGGCGCTGGAGGGCTTCACGATGTTCGCCCTCAACCAGGGCGAGGTGTGCACCTGCCCGTCGC
GCAGCCTGGTCCAGGCCGACATCTACGACGAGTTCCTGGAGCTGGCCGCGATCCGCACCAAGGCGGTCCGGCAGGGCGAC
CCGCTGGACTCCGAGACCATGCTGGGGTCGCAGGCGTCCAACGACCAGCTGGAAAAGGTGTTGTCCTACATCGAAATCGG
CAAGGACGAGGGCGCCAAGGTGATCACCGGAGGCGAACGCGCCGAGCTCGGCGGCGACCTGTCCGGCGGCTTCTACATGC
AGCCCACCATCCTGGGCGGCGACAACTCGATGCGGGTCTTCCAGGAGGAGATCTTCGGGCCGGTGGTGGCGGTGACGTCG
TTCTCCGATTACGACGACGCGATGTCGATCGCCAACGACACCCTCTACGGCCTGGGGGCGGGGGTGTGGAGCCGCGACGG
CAACACCGCCTACCGGGCCGGGCGCGACATCCAGGCCGGCCGGGTGTGGGTGAACTGCTACCACGTCTATCCCGCCCACG
CGGCGTTCGGCGGCTACAAGCAGTCCGGCATCGGCCGGGAGAACCACAAGATGATGCTGGACCACTATCAGCAGACCAAG
AACATGCTGGTGTCCTACTCCGAGAAGGCGCAAGGGTTCTTCTGA

Protein sequence :
MSYESRYENFIGGQWVPPARGRYFENPTPVTGQTFCEVARSDEADVDKALDAAHAAAPAWGKTAPAERAAILNKIADRID
EHTAALAVAEVWDNGKPIREALAADIPLAADHFRYFAAALRAQEGSLSQIDDDTVAYHFHEPLGVVGQIIPWNFPILMGA
WKLAPALAAGNAVVLKPAEQTPVSVLYLMSLIGDLLPPGVINVVSGFGAEAGKPLASSNRIAKIAFTGETTTGRLIMQYA
SQNLIPVTLELGGKSPNIFFSDVMAKADDYQDKALEGFTMFALNQGEVCTCPSRSLVQADIYDEFLELAAIRTKAVRQGD
PLDSETMLGSQASNDQLEKVLSYIEIGKDEGAKVITGGERAELGGDLSGGFYMQPTILGGDNSMRVFQEEIFGPVVAVTS
FSDYDDAMSIANDTLYGLGAGVWSRDGNTAYRAGRDIQAGRVWVNCYHVYPAHAAFGGYKQSGIGRENHKMMLDHYQQTK
NMLVSYSEKAQGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-141 60
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-147 60
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-147 60
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-147 60
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-146 60
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-68 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCU_45580 YP_005340098.1 hypothetical protein VFG0082 Protein 1e-141 60