Gene Information

Name : OCU_42920 (OCU_42920)
Accession : YP_005339832.1
Strain : Mycobacterium intracellulare ATCC 13950
Genome accession: NC_016946
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4524227 - 4524922 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGTCGAACTTTGCAACGTCGTGCGCGAATACCGGGTCGGCGGTCAAACGGTGCGGGCGCTCGACGGCGTCAGCCT
GCGGCTGGCGGACGAGCAGTTCGTGTCGGTCGTCGGACCGTCCGGGGCGGGCAAGAGCACGCTGTTGCACGTGCTCGGCG
CCTTGGATTCCCCCGATTCCGGGTCGATCGCCTTCGATGGCGAGGAAATCGCCCGCCTTAGCGATGAACAGCAGTCGCGG
TTCCGCCATCGGCGGGTGGGTTTCATCTTTCAGTTCTTCAACCTGCTGCCGACGCTGTCGGCCTGGGAGAACGTGGCGAT
TCCCAAGCTGCTCGACGGAGTCCGGTTGGGCAGCGCCAAGCCGGACGCGATCCGCCTGCTGGACCGGGTCGGGCTCGGCA
ACCGGGCGCAGCACCGGCCGGCGGAACTGTCCGGCGGCCAAATGCAGCGGGTCGCGGTCGCGCGTGCCTTGATGATGAAC
CCGCCGCTGATCCTCGCCGACGAGCCGACCGGAAACCTGGACTCCGCGACGGGCGCGTCCATTTTGGCGCTGTTGGCGGA
GGTGGCGCACGAGGAGGGTGGGGGTCGGCTGGTGGTGATGGTGACCCACAACGCCGACGCGGCCGCGGCCACCGACCGGG
TGATCACGCTGCAGGACGGTCGCGTCGGTTCGGACGTGATGGCGGTCGCGGGGTGA

Protein sequence : 
MTVELCNVVREYRVGGQTVRALDGVSLRLADEQFVSVVGPSGAGKSTLLHVLGALDSPDSGSIAFDGEEIARLSDEQQSR
FRHRRVGFIFQFFNLLPTLSAWENVAIPKLLDGVRLGSAKPDAIRLLDRVGLGNRAQHRPAELSGGQMQRVAVARALMMN
PPLILADEPTGNLDSATGASILALLAEVAHEEGGGRLVVMVTHNADAAAATDRVITLQDGRVGSDVMAVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCU_42920 YP_005339832.1 ABC transporter ATPase CP001581.1.gene598.p Protein 9e-41 46
OCU_42920 YP_005339832.1 ABC transporter ATPase NC_012469.1.7686878. Protein 8e-47 45
OCU_42920 YP_005339832.1 ABC transporter ATPase CP001581.1.gene798.p Protein 8e-39 44
OCU_42920 YP_005339832.1 ABC transporter ATPase NC_008702.1.4606598. Protein 6e-39 44