Gene Information

Name : OCU_38500 (OCU_38500)
Accession : YP_005339390.1
Strain : Mycobacterium intracellulare ATCC 13950
Genome accession: NC_016946
Putative virulence/resistance : Unknown
Product : ssrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4075648 - 4076157 bp
Length : 510 bp
Strand : -
Note : -

DNA sequence :
GTGGCCAAGGGATCCGGCCGGGCCAAGGCGGCGGGCGGCAAAGGCGGCAGCAAACAAGTTGTGGCCACCAATCGCAAAGC
GCGGCATAACTATTCGATCATCGAATCGTTCGAGGCCGGGGTCGCGCTGCAAGGCACCGAGGTCAAAAGCCTGCGCGAGG
GCCAAGCTTCGTTAGCTGACGCCTTCGCAACGATCGACGACGGCGAAGTGTGGTTGCGCAACTTGTACATTGCGGAGTAC
CAGCACGGTAGCTGGACCAATCATGACCCCCGGCGCAACCGAAAGTTGTTGTTACATCGGCAACAAATCGACAGGCTGGT
CGGCAAGATTCGAGATGGTAACCTCGCCTTGATGCCGCTGTCTCTGTATTTCTCCGAGGGCAAGGTCAAGGTCGAACTGG
CCCTTGCGCGCGGCAAAAGGGCTTACGACAAACGCCAGGACATGGCCCAGCGCGACGCACAGCGCGAAGTGGTCCGTGAA
CTAGGGCGCCGAGCGAAGGGCATGACCTGA

Protein sequence :
MAKGSGRAKAAGGKGGSKQVVATNRKARHNYSIIESFEAGVALQGTEVKSLREGQASLADAFATIDDGEVWLRNLYIAEY
QHGSWTNHDPRRNRKLLLHRQQIDRLVGKIRDGNLALMPLSLYFSEGKVKVELALARGKRAYDKRQDMAQRDAQREVVRE
LGRRAKGMT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-47 68
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-33 48
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-23 44