Gene Information

Name : OCU_30030 (OCU_30030)
Accession : YP_005338543.1
Strain : Mycobacterium intracellulare ATCC 13950
Genome accession: NC_016946
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 3194797 - 3196131 bp
Length : 1335 bp
Strand : -
Note : -

DNA sequence :
ATGGACGTCGCCCGGTTGAACTTCAGCCACGGTGATTACGCCGATCACAAAGCGGCCTACGAACGGGTCCGGGTGGCCTC
CGACGCCACCGGCCGTGCCGTCGGCGTGCTCGCCGATTTGCAGGGCCCCAAGATCAGGCTGGGACGCTTCGCGACCGGCC
CAACCTACTGGGCCGACGGTGAGACCGTCCGGATCACCGTCGCCGACTGCGAGGGCAGCCACGACCGGGTGTCGACCACC
TACAAGAAACTGGCCGAGGACGCCGCCGTCGGTGACCGGGTTCTGGTCGACGACGGCAAGGTCTGCCTGGTGGTCGATGG
CATCGAGGGCGACGACGTCATCTGCACGGTCGTCGAGGGCGGCCCGGTCAGCAACAACAAGGGAATCTCGTTGCCGGGCA
TGAACGTGTCGGCACCGGCCTTGTCGGAGAAGGACATCGAGGACCTCACCTTCGCCCTGGACCTCGGCGTCGACCTGGTC
GCCCTGTCCTTCGTGCGCTCGCCGGCCGACGTCGAGCTGGTGCACGAGGTGATGGACCGGGTCGGGCGACGGGTTCCGGT
GATCGCCAAGCTGGAAAAGCCCGAAGCCGTCGACAATCTGGAAGCCATCGTGCTGGCCTTCGACGCCATCATGGTGGCCC
GCGGCGACCTCGGCGTCGAGCTGCCACTGGAAGAGGTTCCGCTGGTGCAGAAGCGGGCCATCCAGATGGCCCGGGAGAAC
GCGAAACCGGTCATCGTGGCCACCCAGATGCTCGATTCCATGATCGAGAACTCACGCCCGACCCGCGCCGAGGCCTCCGA
CGTCGCCAACGCCGTCCTCGACGGCGCCGACGCGGTGATGCTGTCCGGGGAGACGTCGGTGGGCAAGTATCCGATGGCTG
CCGTGCGGACCATGTCGCGCATCATCTGCGCGGTCGAGGACAATTCCACGGCCGCCCCGCCGCTGACCCACGTGCCGCGC
ACCAAACGCGGCGTGATCTCCTATGCGGCCCGCGACATCGGCGAGCGGCTCGACGCCAAAGCCCTGGTCGCCTTCACCCA
ATCCGGCGACACGGTCAAGCGGCTCGCGCGCCTGCACACCCCGCTGCCGCTGCTGGCCTTCACCGCCTGGCCCGAGGTGC
GCAGCCAGCTCGCCATGACCTGGGGCACCGAAACGTTCATCGTCCCGATGATGACCTCCACGGACGGCATGATCCGCCAG
GTCGACAAGTCGCTGCTCGAACTCGGTCGCTACAAGCGCGGCGACCTGGTGGTCATCGTCGCCGGCGCGCCACCTGGCAC
AGTAGGGTCGACCAACCTGATCCACGTGCACCGGATCGGGGAGGACGACGTCTAA

Protein sequence :
MDVARLNFSHGDYADHKAAYERVRVASDATGRAVGVLADLQGPKIRLGRFATGPTYWADGETVRITVADCEGSHDRVSTT
YKKLAEDAAVGDRVLVDDGKVCLVVDGIEGDDVICTVVEGGPVSNNKGISLPGMNVSAPALSEKDIEDLTFALDLGVDLV
ALSFVRSPADVELVHEVMDRVGRRVPVIAKLEKPEAVDNLEAIVLAFDAIMVARGDLGVELPLEEVPLVQKRAIQMAREN
AKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPMAAVRTMSRIICAVEDNSTAAPPLTHVPR
TKRGVISYAARDIGERLDAKALVAFTQSGDTVKRLARLHTPLPLLAFTAWPEVRSQLAMTWGTETFIVPMMTSTDGMIRQ
VDKSLLELGRYKRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-63 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-63 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCU_30030 YP_005338543.1 pyruvate kinase VFG0479 Protein 2e-63 41