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Name : OCU_29560 (OCU_29560) Accession : YP_005338496.1 Strain : Mycobacterium intracellulare ATCC 13950 Genome accession: NC_016946 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3138369 - 3141614 bp Length : 3246 bp Strand : + Note : - DNA sequence : GTGGGTGTCATCGCCACCGTGTCGCTGCTGGGCAGTGTGTCCCCCCTGATCCGTTACCTGATCAAGGTTCCGCGCGAGTT CATCAACGACTATCTGTTCAACTTCCCCGACACCAGCATCGCGTGGTCGTTCGTGTTGGCCTTGTTGGCCGCGGCCCTGA CCGCGCGCAAGCGGATCGCCTGGCTGCTGTTGCTGGGCAACATGATTCTCGCCGCCGGCCTGAACGCCGCCGATATCGCC GCCGGGGACAACACCGCCGCCGAGATCTTGGGCGAGAATCTCGGGTTCGCCCTGCACATCGTCGCGATCGTCCTGCTGGT GTTGGCCTATCGGGAGTTCTGGGCCAAGGTCCGCCGGGGCGCGCTGGTCAAGGCGGCCGGCGTGCTGGTGGCCGGCGATG TGGTGGGGATCTTGGTGTCCTGGGGCCTGGTCGAGTTGTTCCCCGGAACGCTGGCCCGCCCGGATCGCCTGCCCTACGTG GCCAACCGGGTGGTCGGATTCGCGCTCGCCGATCCGGACCTGTTCACCGGCCGGCCGCACGTGTTCCTCAACGCGATCTT CGGTCTGTTCGGCGCGCTCGCGCTGATCATGGCGACGATCGTGCTCTTTCAATCTCAGCGCGCGGAGAACGCGCTCACCG GCGAGGACGAATCGGCCATCCGCGGGCTGCTCGAGCTGTACGGCAAGAACGACTCCCTGGGCTACTTCGCCACCCGCCGC GACAAGTCGGTGGTTTTCGCCCAGAGCGGGCGCGCCGCCATCACCTACCGGGTCGAGGTCGGCGTCTGCCTGGCCAGCGG CGACCCGATCGGCGATCCCCGGGCGTGGTCCCAGGCCGCCGACGCCTGGCTGGGTCTGTGCCAAACCTACGGCTGGGCGC CCGGCGTCATGGGCGCCAGCACCCAGGGGGCGCGGACATATCGCGAAGCCGGCCTGAACGCGCTGGAGCTCGGCGACGAG GCCATCCTGCGGACCGCCGACTTCAAGCTGTCCGGCCCCGACATGCGCGGAGTCCGACAGGCCGTGACCCGCGCCCGCCG GGCCGGCCTGACCGTGCGGATCCGGCGGCACCGCGACATCGGCGCCGACGAGATGGCCGACACCATCACCCGCGCCGACG CCTGGCGCGACACCCAAACCGAGCGCGGGTTTTCCATGGCGCTGGGCCGCCTCGGCGACCCCGCCGACGGGGACTGCCTG CTGGTCGAGGCCCTGGACCGGGACGGCGCCGTCGTCGCGATGCTGTCGCTGGTCCCGTGGGGAACCACCGGCGTCTCCCT GGACCTGATGCGCCGATCGCCCCAGTCCCCCAACGGCACCATCGAGCTGATGGTCAGCGACCTCGCACTCAACGCGGAAA ACCTTGGCATCACCCGCATTTCACTGAACTTCGCGATGTTCCGCTCGGCTTTCGAACAGGGTGCCCAACTGGGCGCCGGC CCCGTCGCGCGGCTGTGGCGCGGGTTTTTGCTGTTCTTCTCGCGGTGGTGGCAGCTGGAGACGCTGTATCGCTCCAACAT GAAGTACCAGCCCGAATGGGTGCCGCGGTATGCCTGCTACGAGGACGCCCGCCTGATCCCGCGGGTCGGGGTCGCCTCGG CGCTGGCCGAGGGCTTCCTCGTCCTGCCGTTCGGCCGGCGCAAGCCGCACACGGGTCACCACCCGGCCGTCCCCGCCCGG CTGGCCGCGTCCGGGCTGCTGCACCACGACGGGAGCGCGCCGGACGTCAGCGGGCTGCAGAGGCGCCAGGAGTCGGCCGA CGAGGAAGAGGCGAGATCCCGGCTGCCCGAGCAGGTTCGGGTGCGCCTGGCCAAGTTGAAGGTGTTGCGGCGCAAGGGCA TCGACGCGTATCCGGTGGGCCATCCGCCCAGTCACACCGTCGCCGCGGCGCTCGACACGGACGACCGGGAGACGATCACC GTCTCCGGCCGGATACTGCGAATACGCGACTACGGCGGGGTGCTATTCGCCCACCTGCGTGACTGGTCGGGGGAAATGCA AGTGCTGCTGGACAATTCGCAGTTGCAGCGCGGGCGAACGGCCGACTTCACGGCGGCCATCGATCTTGGCGACTTGGTCG AGGTCTCCGGCCACATGGGCTTTTCCAAGAAGGGAACCCGCTCGCTGATCGTCGGCGACTGGCGGATGATCGGTAAGTGC TTGCGGCCGTTGCCCAACAAGTGGAAGGGGCTCACCGATCCGGAGGCCCGGGTGCGGACCCGCTACGTCGACCTGGCGGT CAATCCCGAGTCTCGCGAATTGATCACGGCACGCAGCGAGGTGTTGCGCTCGGTCCGGCAGACGCTGTTCGACAAGGGGT TCATCGAAGTCGAGACCCCGATCCTGCAGCAGATCCACGGCGGAGCCACCGCCCGGCCGTTCGTCACGCACATCAACACC TACGACATGGACCTGTTCCTGCGGATCGCGCCGGAGCTCTACCTCAAGCGGTTATGCGTCGGCGGCGTCGAGCGGGTCTT CGAGCTGGGCCGGGCCTTCCGCAACGAGGGCGTGGACTTCAGCCACAACCCGGAGTTCACCCTGCTGGAGGCGTATCAGG CGCACGCCGACTACAAGGTCTGGATCGACGGGTGCCGCGAGCTGATCCAGAACGCCGCCGAGGCCGCCCACGGCGAGCAG GCCGTCATGCGCCCCCGCGACCAAGGCACCGGTGGCGGCCTCAAGCCGGTCGACATCTCCGGCGTGTGGGCGGTCAAGAC CGTGTACGACGCCGTCTCCGAAGCACTCGGCGAGCACATCGACCCCGCCACGCCGCTGCCCGCGCTGCGCAAGCTGTCGG ATGCCGCGCACATTCCGTATCGGGCGCACTGGGACGCCGGGGCGGTGGTGCTGGAGCTGTACGAGCATCTGGTCGAGGAC CGGACCGAGGAGCCGACGTTCTATATCGACTTCCCGACGTCGGTGTCGCCACTGACCCGCCCGCATCGCAGCGAGCCCGG CGTCGCCGAGCGGTGGGACCTGGTGGCGTGGGGTGTCGAGCTGGCCACCGCCTACAGCGAGCTCACCGATCCGGTGGAAC AGCGTCGCCGCCTGCAGGAGCAGTCGCTGTTGGCCGCGGGTGGGGATCCCGAGGCGATGGAGCTCGACGAAGACTTCCTG CAGGCGATGGAATACGCGATGCCGCCCACCGGCGGACTCGGGATGGGCGTCGATCGCCTCGTCATGCTCATAACGGGTCG CAGCATCCGGGAGACGCTGCCGTTCCCGCTGGCCAAACCCCATTGA Protein sequence : MGVIATVSLLGSVSPLIRYLIKVPREFINDYLFNFPDTSIAWSFVLALLAAALTARKRIAWLLLLGNMILAAGLNAADIA AGDNTAAEILGENLGFALHIVAIVLLVLAYREFWAKVRRGALVKAAGVLVAGDVVGILVSWGLVELFPGTLARPDRLPYV ANRVVGFALADPDLFTGRPHVFLNAIFGLFGALALIMATIVLFQSQRAENALTGEDESAIRGLLELYGKNDSLGYFATRR DKSVVFAQSGRAAITYRVEVGVCLASGDPIGDPRAWSQAADAWLGLCQTYGWAPGVMGASTQGARTYREAGLNALELGDE AILRTADFKLSGPDMRGVRQAVTRARRAGLTVRIRRHRDIGADEMADTITRADAWRDTQTERGFSMALGRLGDPADGDCL LVEALDRDGAVVAMLSLVPWGTTGVSLDLMRRSPQSPNGTIELMVSDLALNAENLGITRISLNFAMFRSAFEQGAQLGAG PVARLWRGFLLFFSRWWQLETLYRSNMKYQPEWVPRYACYEDARLIPRVGVASALAEGFLVLPFGRRKPHTGHHPAVPAR LAASGLLHHDGSAPDVSGLQRRQESADEEEARSRLPEQVRVRLAKLKVLRRKGIDAYPVGHPPSHTVAAALDTDDRETIT VSGRILRIRDYGGVLFAHLRDWSGEMQVLLDNSQLQRGRTADFTAAIDLGDLVEVSGHMGFSKKGTRSLIVGDWRMIGKC LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELITARSEVLRSVRQTLFDKGFIEVETPILQQIHGGATARPFVTHINT YDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYKVWIDGCRELIQNAAEAAHGEQ AVMRPRDQGTGGGLKPVDISGVWAVKTVYDAVSEALGEHIDPATPLPALRKLSDAAHIPYRAHWDAGAVVLELYEHLVED RTEEPTFYIDFPTSVSPLTRPHRSEPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFL QAMEYAMPPTGGLGMGVDRLVMLITGRSIRETLPFPLAKPH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-161 | 44 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-160 | 44 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-161 | 44 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-161 | 44 |
