Gene Information

Name : OCU_22370 (OCU_22370)
Accession : YP_005337777.1
Strain : Mycobacterium intracellulare ATCC 13950
Genome accession: NC_016946
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 2326551 - 2327987 bp
Length : 1437 bp
Strand : -
Note : -

DNA sequence :
GTGACGGAAAAGACGCCCGACGACGTCTTCAAACTCGCGAAGGACGAAAACGTCGAGTTTGTCGACGTGCGGTTCTGTGA
TTTGCCCGGCATCATGCAGCACTTCACCATTCCGATTTCGTTTTTCGACGAGAGCGTTTTTGAGGACGGCTTGGCATTCG
ACGGCTCGTCCATTCGCGGATTCCAGTCCATTCACGAATCGGACATGTTGCTCCTGCCCGACCCCGCGACGGCGCAGATC
GACCTGTTCCGCGAAGCCAAGACCCTGAACCTGAACTTCTTCGTGCACGACCCCTTCACCCTCGAGCCGTACTCGCGCGA
CCCCCGCAACATCGCCCGTAAGGCCGAGAACTACCTGATCAGCACCGGCGTTGCCGACACCGCGTACTTCGGCGCCGAGG
CCGAGTTCTACATCTTCGACTCGGTGAGCTTCGATTCGCGCACCAACGGCTCGTTCTACGAGATCGACGCGATCTCGGGC
TGGTGGAACACCGGCTCGCCCAACGAGCTCGACGGCAGCCCCAACCGCGGCTACAAGGTCCGCCCCAAGGGTGGCTACTT
CCCCGTCGCCCCCGTCGACCACTACGTCGACCTGCGCGACAAGATGCTGTCCAACCTGATCACCGCCGGCTTCAGCCTGG
AAAAGGGTCACCACGAGGTGGGCACCGGCGGCCAGGCCGAGATCAACTACAAGTTCAACACGCTGCTGCACGCGGCCGAC
GACATGATGCTCTACAAGTACATCGTCAAGAACACGGCCTGGCAGCACGGCAAGACCGTCACGTTCATGCCCAAGCCGCT
GTTCGGTGACAACGGCTCCGGCATGCACACCCACCAGTCGCTGTGGAAGGACGGCAGCCCGCTGATGTACGACGAGACCG
GTTACGCCGGCCTGTCGGACACCGCCCGCCACTACATCGGAGGCCTGCTGCACCACGCCCCGTCGCTGCTGGCGTTCACC
AACCCCACGGTGAACTCCTACAAGCGGCTGGTGCCCGGCTACGAGGCCCCGATCAACCTGGTCTACAGCCAGCGCAACCG
CTCGGCCTGTGTCCGAATCCCGATCACCGGCACCAACCCGAAGGCCAAGCGCCTCGAGTTCCGTTGCCCCGACTCCTCGG
GCAACCCGTACCTGGCGTTCTCGGCCATGCTGATGGCCGGCCTGGACGGCATCAAGAACAAGATCGAGCCGCAGGCCCCG
GTCGACAAGGACCTCTACGAGCTGCCGCCCGAAGAGGCCGCCAACATCCCGCAGGCGCCCACGCAGCTGTCCGCGGTGAT
CGACCGGCTGGAAGAAGACCACGAATACCTCACCGAGGGCGGCGTTTTCACGCCCGACCTCATCGAGACGTGGATCAACT
TCAAGCGCGAGAACGAGATCCTGCCGGTCCAGATCCGGCCGCACCCCTACGAATTCGCGCTGTACTACGACGTTTAA

Protein sequence :
MTEKTPDDVFKLAKDENVEFVDVRFCDLPGIMQHFTIPISFFDESVFEDGLAFDGSSIRGFQSIHESDMLLLPDPATAQI
DLFREAKTLNLNFFVHDPFTLEPYSRDPRNIARKAENYLISTGVADTAYFGAEAEFYIFDSVSFDSRTNGSFYEIDAISG
WWNTGSPNELDGSPNRGYKVRPKGGYFPVAPVDHYVDLRDKMLSNLITAGFSLEKGHHEVGTGGQAEINYKFNTLLHAAD
DMMLYKYIVKNTAWQHGKTVTFMPKPLFGDNGSGMHTHQSLWKDGSPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFT
NPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIPITGTNPKAKRLEFRCPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAP
VDKDLYELPPEEAANIPQAPTQLSAVIDRLEEDHEYLTEGGVFTPDLIETWINFKRENEILPVQIRPHPYEFALYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-88 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCU_22370 YP_005337777.1 glutamine synthetase, type I VFG1399 Protein 0.0 92