|
Name : OCU_12370 (OCU_12370) Accession : YP_005336777.1 Strain : Mycobacterium intracellulare ATCC 13950 Genome accession: NC_016946 Putative virulence/resistance : Unknown Product : integrase core domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 1246385 - 1247098 bp Length : 714 bp Strand : - Note : - DNA sequence : ATGCACGCGGCGATGACACGGCGTGGTTGGCAGCTGGGCCGTGAACAAACCCGCCGGTTGATGCGCAAGGCCGGGTTGCG CGGCGCCCAGCGGGGCAAGCCGGTGTTCACCACGATCAGCGACCCGGCCGCGATCCGGCCGGCCGATCTGGTCAACCGCC AATTCCGGGCTGCTGCACCGAACCGGCTATGGGTCGCCGACATCACGTTCGTGCGGACCTGGCAGGGGTTCTGTTACACC GCGTTCGTCACTGATGCGTGCACGAAGAAGATCGTTGGCTGGGCGGTCTCGGCCACGATGCGCACCGAAGACCTCCCACT TCAAGCATTCAATCACGCTGTGTGGCAGTCGAATACCGATCTATCCGAGTTGGTTCATCATTCCGACCGCGGATCCCAGT ACCTATCGCTGGCCTATACCGACCGGCTGGCTGAACTGGGGATCGCGCCCTCGGTCGGGTCGCGTGGCGATAGTTATGAC AACGCCCTCGCTGAAGCGGTCAACGCCGCCTACAAGACCGAGCTCATCAACCGCGGCAAGCCCTGGCGGTGCATCGATGA TGTCGAACTCTCGACCGCCGAATGGGTGGCCTGGTACAACCAGGAACGCCTGCACGAAGGCCTCGGCTACGTTCCACCCG CCGAGTACGAGGCCGCCCTCACCGGCACCTCACACCATGCGAGCCAGCCGACCCCGGCCCTCGCAACCGAGTAG Protein sequence : MHAAMTRRGWQLGREQTRRLMRKAGLRGAQRGKPVFTTISDPAAIRPADLVNRQFRAAAPNRLWVADITFVRTWQGFCYT AFVTDACTKKIVGWAVSATMRTEDLPLQAFNHAVWQSNTDLSELVHHSDRGSQYLSLAYTDRLAELGIAPSVGSRGDSYD NALAEAVNAAYKTELINRGKPWRCIDDVELSTAEWVAWYNQERLHEGLGYVPPAEYEAALTGTSHHASQPTPALATE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 7e-54 | 56 |
| tnpC | AAD44736.1 | TnpC | Not tested | SHI-2 | Protein | 2e-41 | 54 |
| S4063 | NP_839232.1 | IS629 orfB | Not tested | SHI-2 | Protein | 5e-42 | 53 |
| Z4334 | NP_289559.1 | IS629 transposase | Not tested | OI-122 | Protein | 7e-42 | 53 |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 5e-42 | 53 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 2e-41 | 53 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 1e-41 | 53 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 3e-40 | 52 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 3e-40 | 52 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 2e-40 | 52 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 3e-40 | 52 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 3e-41 | 52 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 1e-41 | 52 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 1e-41 | 52 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 7e-41 | 51 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 5e-41 | 51 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 3e-41 | 49 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 3e-41 | 49 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 7e-40 | 49 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 1e-40 | 49 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 1e-40 | 49 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 4e-38 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| OCU_12370 | YP_005336777.1 | integrase core domain-containing protein | VFG1602 | Protein | 2e-38 | 49 |
